RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 LBHQ53QV2 105 aaPredicted RBP16.93■□□□□ 0.3
TMEM260-203ENST00000539559 ABHD17BQ5VST6 288 aa16.93■□□□□ 0.3
TMEM260-203ENST00000539559 PSG11Q9UQ72 335 aa16.93■□□□□ 0.3
TMEM260-203ENST00000539559 VENTXO95231 258 aa16.92■□□□□ 0.3
TMEM260-203ENST00000539559 OR9G9P0C7N8 305 aa16.92■□□□□ 0.3
TMEM260-203ENST00000539559 SLC25A40Q8TBP6 338 aa16.92■□□□□ 0.3
TMEM260-203ENST00000539559 MS4A10Q96PG2 267 aa16.92■□□□□ 0.3
TMEM260-203ENST00000539559 POLDIP2Q9Y2S7 368 aa16.92■□□□□ 0.3
TMEM260-203ENST00000539559 FRMD6-AS1P0C7T7 363 aa16.92■□□□□ 0.3
TMEM260-203ENST00000539559 RPL29P47914 159 aaKnown RBP16.92■□□□□ 0.3
TMEM260-203ENST00000539559 TGFBR3Q03167 851 aa16.92■□□□□ 0.3
TMEM260-203ENST00000539559 BCL2L2Q92843 193 aaPredicted RBP16.92■□□□□ 0.3
TMEM260-203ENST00000539559 DEFB127Q9H1M4 99 aa16.92■□□□□ 0.3
TMEM260-203ENST00000539559 FZR1Q9UM11 496 aa16.92■□□□□ 0.3
TMEM260-203ENST00000539559 PXMP4Q9Y6I8 212 aa16.92■□□□□ 0.3
TMEM260-203ENST00000539559 SCO2A0A1W2PP80 73 aa16.91■□□□□ 0.3
TMEM260-203ENST00000539559 A0A1W2PPV4 95 aa16.91■□□□□ 0.3
TMEM260-203ENST00000539559 TMEM30CPA0ZSE6 113 aa16.91■□□□□ 0.3
TMEM260-203ENST00000539559 TNFSF15O95150 251 aa16.91■□□□□ 0.3
TMEM260-203ENST00000539559 CCKARP32238 428 aa16.91■□□□□ 0.3
TMEM260-203ENST00000539559 TMEM144Q7Z5S9 345 aa16.91■□□□□ 0.3
TMEM260-203ENST00000539559 NINJ1Q92982 152 aa16.91■□□□□ 0.3
TMEM260-203ENST00000539559 COQ2Q96H96 371 aa16.91■□□□□ 0.3
TMEM260-203ENST00000539559 NAGKQ9UJ70 344 aa16.91■□□□□ 0.3
TMEM260-203ENST00000539559 SMPD2O60906 423 aa16.91■□□□□ 0.3
TMEM260-203ENST00000539559 ARL14EPLP0DKL9 152 aa16.91■□□□□ 0.3
TMEM260-203ENST00000539559 CATR1Q13166 79 aa16.91■□□□□ 0.3
TMEM260-203ENST00000539559 TRIP6Q15654 476 aaKnown RBP16.91■□□□□ 0.3
TMEM260-203ENST00000539559 HCFC1P51610 2035 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 MARCH11A6NNE9 402 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 CLDN14O95500 239 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 CBLN1P23435 193 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 CD1BP29016 333 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 MPV17P39210 176 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 MIC13Q5XKP0 118 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 SFRP2Q96HF1 295 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 TBX15Q96SF7 602 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 OBP2BQ9NPH6 170 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 ELOVL5Q9NYP7 299 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 KMT2EQ8IZD2 1858 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 C17orf112F2Z3M2 114 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 SLC17A3O00476 420 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 RRHO14718 337 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 PSG7Q13046 419 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 PRAMEF6Q5VXH4 476 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 OR13A1Q8NGR1 328 aa16.9■□□□□ 0.3
TMEM260-203ENST00000539559 AQP7O14520 342 aa16.89■□□□□ 0.29
TMEM260-203ENST00000539559 ERVFC1-1P60608 527 aa16.89■□□□□ 0.29
TMEM260-203ENST00000539559 RAB4BP61018 213 aa16.89■□□□□ 0.29
TMEM260-203ENST00000539559 TBC1D28Q2M2D7 210 aa16.89■□□□□ 0.29
TMEM260-203ENST00000539559 VWC2Q2TAL6 325 aa16.89■□□□□ 0.29
TMEM260-203ENST00000539559 A6NNC1 897 aa16.89■□□□□ 0.29
TMEM260-203ENST00000539559 F6UZH7 168 aa16.89■□□□□ 0.29
TMEM260-203ENST00000539559 LCN2P80188 198 aa16.89■□□□□ 0.29
TMEM260-203ENST00000539559 ZNF705AQ6ZN79 300 aaPredicted RBP16.89■□□□□ 0.29
TMEM260-203ENST00000539559 Q8IYB0 196 aa16.89■□□□□ 0.29
TMEM260-203ENST00000539559 SSMEM1Q8WWF3 244 aa16.89■□□□□ 0.29
TMEM260-203ENST00000539559 RAB29O14966 203 aa16.88■□□□□ 0.29
TMEM260-203ENST00000539559 LYZL6O75951 148 aa16.88■□□□□ 0.29
TMEM260-203ENST00000539559 HLA-DRB5Q30154 266 aa16.88■□□□□ 0.29
TMEM260-203ENST00000539559 TP53TG3Q9ULZ0 132 aa16.88■□□□□ 0.29
TMEM260-203ENST00000539559 CACNA1HO95180 2353 aa16.88■□□□□ 0.29
TMEM260-203ENST00000539559 F2Z2F3 143 aa16.88■□□□□ 0.29
TMEM260-203ENST00000539559 EDDM3AQ14507 147 aa16.88■□□□□ 0.29
TMEM260-203ENST00000539559 OCC1Q8TAD7 63 aa16.88■□□□□ 0.29
TMEM260-203ENST00000539559 ZDHHC11Q9H8X9 412 aa16.88■□□□□ 0.29
TMEM260-203ENST00000539559 WDR83OSQ9Y284 106 aa16.88■□□□□ 0.29
TMEM260-203ENST00000539559 MDFIC2A0A1B0GVS7 189 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 ZNF766Q5HY98 468 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 DCAF10Q5QP82 559 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 C1orf194Q5T5A4 169 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 FBXW9Q5XUX1 488 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 TOMM20LQ6UXN7 152 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 GCNT2Q8N0V5 402 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 R3HDM4Q96D70 268 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 PDE6DO43924 150 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 FCGR3BO75015 233 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 SOX8P57073 446 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 ABHD12Q8N2K0 398 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 CIB3Q96Q77 187 aaPredicted RBP16.87■□□□□ 0.29
TMEM260-203ENST00000539559 MSL2Q9HCI7 577 aa16.87■□□□□ 0.29
TMEM260-203ENST00000539559 TET2Q6N021 2002 aaPredicted RBP16.87■□□□□ 0.29
TMEM260-203ENST00000539559 SPENQ96T58 3664 aaKnown RBP16.87■□□□□ 0.29
TMEM260-203ENST00000539559 TRAV3A0A0B4J244 114 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 OOEPA6NGQ2 149 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 M0R143 59 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 KITLGP21583 273 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 SPATA31B1PQ5VZV4 182 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 Q6ZWC4 215 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 CMTM2Q8TAZ6 248 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 ABI3Q9P2A4 366 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 TMPRSS2O15393 492 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 ZNF25P17030 456 aaPredicted RBP16.86■□□□□ 0.29
TMEM260-203ENST00000539559 CDKN1AP38936 164 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 MEOX1P50221 254 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 LINC00310P59036 64 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 FOXF2Q12947 444 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 ZBTB34Q8NCN2 500 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 MS4A5Q9H3V2 200 aa16.86■□□□□ 0.29
TMEM260-203ENST00000539559 KCNIP2Q9NS61 270 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms