RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 TRBV9A0A0B4J1U6 114 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 TRDV1A0A1B0GX56 115 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 METTL21EPA6NDL7 271 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 FAM223BA6NKX1 122 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 BMPR1BO00238 502 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 CREBL2O60519 120 aaPredicted RBP9.49□□□□□ -0.89
VAMP1-206ENST00000538970 PRH1P02810 166 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 RAB3BP20337 219 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 DTYMKP23919 212 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 MECP2P51608 486 aaKnown RBP9.49□□□□□ -0.89
VAMP1-206ENST00000538970 EXOSC2Q13868 293 aaKnown RBP9.49□□□□□ -0.89
VAMP1-206ENST00000538970 CDK10Q15131 360 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 C10orf55Q5SWW7 151 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 ADAMTSL5Q6ZMM2 481 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 FAM223AQ8IWN6 122 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 ZNF645Q8N7E2 425 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 OR2K2Q8NGT1 345 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 HERC2O95714 4834 aa9.49□□□□□ -0.89
VAMP1-206ENST00000538970 AIREO43918 545 aa9.48□□□□□ -0.89
VAMP1-206ENST00000538970 ARL6IP1Q15041 203 aa9.48□□□□□ -0.89
VAMP1-206ENST00000538970 KCTD9Q7L273 389 aa9.48□□□□□ -0.89
VAMP1-206ENST00000538970 MMD2Q8IY49 270 aa9.48□□□□□ -0.89
VAMP1-206ENST00000538970 TTC9CQ8N5M4 171 aa9.48□□□□□ -0.89
VAMP1-206ENST00000538970 SPIN2AQ99865 258 aa9.48□□□□□ -0.89
VAMP1-206ENST00000538970 SPIN2BQ9BPZ2 258 aa9.48□□□□□ -0.89
VAMP1-206ENST00000538970 ATG5Q9H1Y0 275 aa9.48□□□□□ -0.89
VAMP1-206ENST00000538970 TUBA4BQ9H853 241 aa9.48□□□□□ -0.89
VAMP1-206ENST00000538970 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.47□□□□□ -0.89
VAMP1-206ENST00000538970 J3QRK9 145 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 FCGR3BO75015 233 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 TUSC2O75896 110 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 ACTL6BO94805 426 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 IGLV2-14P01704 120 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 HLA-DQB1P01920 261 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 GALP22466 123 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 NFYAP23511 347 aaPredicted RBP9.47□□□□□ -0.89
VAMP1-206ENST00000538970 RPL30P62888 115 aaKnown RBP9.47□□□□□ -0.89
VAMP1-206ENST00000538970 ATP5G2Q06055 141 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 OR2B11Q5JQS5 317 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 HACD4Q5VWC8 232 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 C22orf42Q6IC83 251 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 IZUMO2Q6UXV1 221 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 LINC00322Q6ZN03 302 aaPredicted RBP9.47□□□□□ -0.89
VAMP1-206ENST00000538970 NECAP1Q8NC96 275 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 CNBD2Q96M20 576 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 PLEKHA3Q9HB20 300 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 BLOC1S6Q9UL45 172 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 MRPS7Q9Y2R9 242 aaKnown RBP9.47□□□□□ -0.89
VAMP1-206ENST00000538970 RBMX2Q9Y388 322 aaKnown RBP9.47□□□□□ -0.89
VAMP1-206ENST00000538970 OR2W1Q9Y3N9 320 aa9.47□□□□□ -0.89
VAMP1-206ENST00000538970 IGKV1D-13A0A0B4J2D9 117 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 SMIM30A4D0T7 59 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 TEX22C9J3V5 150 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 OR2J3O76001 311 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 IFNA6P05013 189 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 CTXN2P0C2S0 81 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 IGKV1-13P0DP09 117 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 CD36P16671 472 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 HSPA13P48723 471 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 CD81P60033 236 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 C15orf32Q32M92 178 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 CD300EQ496F6 205 aaPredicted RBP9.46□□□□□ -0.9
VAMP1-206ENST00000538970 CDNFQ49AH0 187 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 LAX1Q8IWV1 398 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 VKORC1L1Q8N0U8 176 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 NUDCD2Q8WVJ2 157 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 DCUN1D5Q9BTE7 237 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 ST6GALNAC5Q9BVH7 336 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 DCSTAMPQ9H295 470 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 VCX3BQ9H321 246 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 RETNQ9HD89 108 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 PRELID3BQ9Y3B1 194 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 DMRT1Q9Y5R6 373 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 CEPT1Q9Y6K0 416 aa9.46□□□□□ -0.9
VAMP1-206ENST00000538970 HMX3A6NHT5 357 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 NOTOA8MTQ0 251 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 PPP5D1E7EU14 171 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 SLC22A5O76082 557 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 KBTBD11O94819 623 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 EDN2P20800 178 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 EIF4EBP1Q13541 118 aaPredicted RBP9.45□□□□□ -0.9
VAMP1-206ENST00000538970 FAM209BQ5JX69 171 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 CNIH2Q6PI25 160 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 C19orf35Q6ZS72 473 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 SLC25A42Q86VD7 318 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 OR4S2Q8NH73 311 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 TMEM167AQ8TBQ9 72 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 KCTD12Q96CX2 325 aaKnown RBP9.45□□□□□ -0.9
VAMP1-206ENST00000538970 NEURL2Q9BR09 285 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 OR51E2Q9H255 320 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 HIPK2Q9H2X6 1198 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 ZNF257Q9Y2Q1 563 aa9.45□□□□□ -0.9
VAMP1-206ENST00000538970 A0A1B0GW64 132 aa9.44□□□□□ -0.9
VAMP1-206ENST00000538970 TMEM235A6NFC5 223 aa9.44□□□□□ -0.9
VAMP1-206ENST00000538970 C2orf70A6NJV1 201 aa9.44□□□□□ -0.9
VAMP1-206ENST00000538970 ZNF785A8K8V0 405 aa9.44□□□□□ -0.9
VAMP1-206ENST00000538970 NPIPB5A8MRT5 1133 aa9.44□□□□□ -0.9
VAMP1-206ENST00000538970 SSX5O60225 188 aa9.44□□□□□ -0.9
VAMP1-206ENST00000538970 TPPPO94811 219 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms