RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 TCTEX1D1Q8N7M0 179 aa13.89□□□□□ -0.19
CLN6-202ENST00000538696 DDB2Q92466 427 aa13.89□□□□□ -0.19
CLN6-202ENST00000538696 GPR146Q96CH1 333 aa13.89□□□□□ -0.19
CLN6-202ENST00000538696 ZNF48Q96MX3 618 aaPredicted RBP13.89□□□□□ -0.19
CLN6-202ENST00000538696 FAM212BQ9NTI7 297 aaPredicted RBP13.89□□□□□ -0.19
CLN6-202ENST00000538696 TEP1Q99973 2627 aaKnown RBP13.88□□□□□ -0.19
CLN6-202ENST00000538696 H0YIZ8 118 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 FCGR3BO75015 233 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 VDAC1P21796 283 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 PSMB6P28072 239 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 S100A10P60903 97 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 FGL1Q08830 312 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 RAB32Q13637 225 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 IZUMO4Q1ZYL8 232 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 ZNF383Q8NA42 475 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 RNASE11Q8TAA1 199 aaKnown RBP13.88□□□□□ -0.19
CLN6-202ENST00000538696 RPEQ96AT9 228 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 MALSU1Q96EH3 234 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 S1PR3Q99500 378 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 MBD2Q9UBB5 411 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 HILPDAQ9Y5L2 63 aa13.88□□□□□ -0.19
CLN6-202ENST00000538696 A0A1W2PPI3 338 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 SCGB1D2O95969 90 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 SLC25A4P12235 298 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 RPA2P15927 270 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 CEACAM3P40198 252 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 REG1BP48304 166 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 AKR1C2P52895 323 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 SSX2Q16385 188 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 C11orf87Q6NUJ2 197 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 OR4D5Q8NGN0 318 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 LSM10Q969L4 123 aaKnown RBP13.87□□□□□ -0.19
CLN6-202ENST00000538696 ADTRPQ96IZ2 230 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 SPIN2AQ99865 258 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 SPIN2BQ9BPZ2 258 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 MRPL20Q9BYC9 149 aaKnown RBP13.87□□□□□ -0.19
CLN6-202ENST00000538696 HSPB11Q9Y547 144 aa13.87□□□□□ -0.19
CLN6-202ENST00000538696 PIGBOS1A0A0B4J2F0 54 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 ARPC5O15511 151 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 FBP1P09467 338 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 CT45A6P0DMU7 189 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 CT45A5P0DMU8 189 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 CT45A7P0DMV0 189 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 CXCL2P19875 107 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 KIR2DS2P43631 304 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 LGALSLQ3ZCW2 172 aaPredicted RBP13.86□□□□□ -0.19
CLN6-202ENST00000538696 THOC7Q6I9Y2 204 aaKnown RBP13.86□□□□□ -0.19
CLN6-202ENST00000538696 FAM71F2Q6NXP2 309 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 RBMXL1Q96E39 390 aaKnown RBP13.86□□□□□ -0.19
CLN6-202ENST00000538696 RNF126Q9BV68 326 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 MEGF9Q9H1U4 602 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 OR5AC2Q9NZP5 309 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 PRELID3BQ9Y3B1 194 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 FAM96BQ9Y3D0 163 aa13.86□□□□□ -0.19
CLN6-202ENST00000538696 LSM5Q9Y4Y9 91 aaKnown RBP13.86□□□□□ -0.19
CLN6-202ENST00000538696 HMSDA8MTL9 139 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 OOSP1A8MZH6 123 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 RBFOX2O43251 390 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLN6-202ENST00000538696 MBPP02686 304 aaPredicted RBP13.85□□□□□ -0.19
CLN6-202ENST00000538696 P0C879 139 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 FAM157CP0CG43 387 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 G6PCP35575 357 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 Q6ZRM9 215 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 TGIF2LXQ8IUE1 241 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 FOXRED2Q8IWF2 684 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 OR1S1Q8NH92 325 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 THAP6Q8TBB0 222 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 CD300LFQ8TDQ1 290 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 PRDM13Q9H4Q3 707 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 CACNG5Q9UF02 275 aa13.85□□□□□ -0.19
CLN6-202ENST00000538696 IGHV1-3A0A0C4DH29 117 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 K7EPK0 472 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 GAPDHP04406 335 aaKnown RBP13.84□□□□□ -0.19
CLN6-202ENST00000538696 LYL1P12980 280 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 SCGB2A2Q13296 93 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 PRSS54Q6PEW0 395 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 TMEM65Q6PI78 240 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 FAM71E2Q8N5Q1 922 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 SIGLECL1Q8N7X8 197 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 OR4S2Q8NH73 311 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 CFHR4Q92496 578 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 R3HDM4Q96D70 268 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 RRNAD1Q96FB5 475 aaKnown RBP13.84□□□□□ -0.19
CLN6-202ENST00000538696 NABP2Q9BQ15 211 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 MMP24Q9Y5R2 645 aa13.84□□□□□ -0.19
CLN6-202ENST00000538696 A0A1B0GU03 582 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 TXNL1O43396 289 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 PITX3O75364 302 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 NXPH3O95157 252 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 HPRT1P00492 218 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 KRASP01116 189 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 SLC25A6P12236 298 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 SMCO1Q147U7 214 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 CCDC144NLQ6NUI1 221 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 Q6YL49 198 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 ZNF546Q86UE3 836 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 OR8H3Q8N146 312 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 DCUN1D4Q92564 292 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 PLEKHA2Q9HB19 425 aa13.83□□□□□ -0.2
CLN6-202ENST00000538696 SLC35D1Q9NTN3 355 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms