RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PRELID3BQ9Y3B1 194 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 SESN1Q9Y6P5 492 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 UBE2L5PA0A1B0GUS4 154 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 DEFA4P12838 97 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 C4orf17Q53FE4 359 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 ZNF841Q6ZN19 808 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 BBC3Q96PG8 261 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-205ENST00000538545 ATP5SQ99766 215 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 TREM1Q9NP99 234 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 SEC11BP0C7V7 166 aa11.52□□□□□ -0.56
ACTN1-205ENST00000538545 DANCRP0C864 163 aa11.52□□□□□ -0.56
ACTN1-205ENST00000538545 ZP3P21754 424 aa11.52□□□□□ -0.56
ACTN1-205ENST00000538545 CCL20P78556 96 aa11.52□□□□□ -0.56
ACTN1-205ENST00000538545 ZNF266Q14584 549 aa11.52□□□□□ -0.56
ACTN1-205ENST00000538545 EIF5AL1Q6IS14 154 aaKnown RBP11.52□□□□□ -0.56
ACTN1-205ENST00000538545 ABHD12Q8N2K0 398 aa11.52□□□□□ -0.56
ACTN1-205ENST00000538545 ZNF525Q8N782 197 aa11.52□□□□□ -0.56
ACTN1-205ENST00000538545 NCOR1P1Q9H4R4 102 aa11.52□□□□□ -0.56
ACTN1-205ENST00000538545 FAM212BQ9NTI7 297 aaPredicted RBP11.52□□□□□ -0.56
ACTN1-205ENST00000538545 H7C2Y5 167 aa11.52□□□□□ -0.57
ACTN1-205ENST00000538545 IGHV2-70P01814 119 aa11.52□□□□□ -0.57
ACTN1-205ENST00000538545 RELBQ01201 579 aa11.52□□□□□ -0.57
ACTN1-205ENST00000538545 OR4A47Q6IF82 309 aa11.52□□□□□ -0.57
ACTN1-205ENST00000538545 C11orf71Q6IPW1 123 aa11.52□□□□□ -0.57
ACTN1-205ENST00000538545 BTNL8Q6UX41 500 aa11.52□□□□□ -0.57
ACTN1-205ENST00000538545 OR10X1Q8NGY0 326 aa11.52□□□□□ -0.57
ACTN1-205ENST00000538545 LINC00574Q9H8X3 128 aa11.52□□□□□ -0.57
ACTN1-205ENST00000538545 CBLN4Q9NTU7 201 aa11.52□□□□□ -0.57
ACTN1-205ENST00000538545 DAOP14920 347 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 NQO2P16083 231 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 COX7A1P24310 79 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 DLX6P56179 175 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 DEFA5Q01523 94 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 OR4A16Q8NH70 328 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 RITA1Q96K30 269 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 COA4Q9NYJ1 87 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 MMP9P14780 707 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 MEF2CQ06413 473 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-205ENST00000538545 BAXQ07812 192 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 TMEM155Q4W5P6 130 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 SLC35D1Q9NTN3 355 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 KAAG1Q9UBP8 84 aa11.51□□□□□ -0.57
ACTN1-205ENST00000538545 A0A1W2PRD5 423 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 A0A1W2PRF3 423 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 A0A1W2PRM7 423 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 IGHV1-8P0DP01 117 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 ELLP55199 621 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-205ENST00000538545 SLC38A11Q08AI6 406 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 PJVKQ0ZLH3 352 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 OR4S2Q8NH73 311 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 MMP26Q9NRE1 261 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 NUP50Q9UKX7 468 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 C22orf46C9J442 243 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 RRHO14718 337 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 HMGB3O15347 200 aaKnown RBP11.5□□□□□ -0.57
ACTN1-205ENST00000538545 M6PRP20645 277 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 ERVK-16P61578 105 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 GUCA2BQ16661 112 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 TMEM14EPQ6UXP3 125 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 EIF4E3Q8N5X7 224 aaKnown RBP11.5□□□□□ -0.57
ACTN1-205ENST00000538545 OR13D1Q8NGV5 346 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 CD300LFQ8TDQ1 290 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 RAB1BQ9H0U4 201 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 SIRT7Q9NRC8 400 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 J3QR06 171 aa11.5□□□□□ -0.57
ACTN1-205ENST00000538545 PMS2P5A8MQ11 134 aa11.49□□□□□ -0.57
ACTN1-205ENST00000538545 THBS3P49746 956 aa11.49□□□□□ -0.57
ACTN1-205ENST00000538545 PPOXP50336 477 aa11.49□□□□□ -0.57
ACTN1-205ENST00000538545 BTN1A1Q13410 526 aa11.49□□□□□ -0.57
ACTN1-205ENST00000538545 SSX7Q7RTT5 188 aa11.49□□□□□ -0.57
ACTN1-205ENST00000538545 SAT2Q96F10 170 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-205ENST00000538545 C15orf62A8K5M9 175 aa11.49□□□□□ -0.57
ACTN1-205ENST00000538545 SHOXO15266 292 aa11.49□□□□□ -0.57
ACTN1-205ENST00000538545 TSPAN15O95858 294 aa11.49□□□□□ -0.57
ACTN1-205ENST00000538545 TMEM170AQ8WVE7 144 aa11.49□□□□□ -0.57
ACTN1-205ENST00000538545 RARRES2Q99969 163 aa11.49□□□□□ -0.57
ACTN1-205ENST00000538545 PARP11Q9NR21 331 aa11.49□□□□□ -0.57
ACTN1-205ENST00000538545 STRAPQ9Y3F4 350 aaKnown RBP11.49□□□□□ -0.57
ACTN1-205ENST00000538545 PPIAL4CA0A0B4J2A2 164 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 TMEM218A2RU14 115 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 E7EUB6 86 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 IFNA10P01566 189 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 IFNA5P01569 189 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 PPIAL4GP0DN37 164 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 ARF6P62330 175 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 RAB9BQ9NP90 201 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 HEYLQ9NQ87 328 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-205ENST00000538545 ONECUT1Q9UBC0 465 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 FBN2P35556 2912 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 FAM90A26D6RGX4 464 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 ATG12O94817 140 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 SAA1P0DJI8 122 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-205ENST00000538545 FGF8P55075 233 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-205ENST00000538545 F2RL1P55085 397 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 BLOC1S1P78537 153 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 WDR25Q64LD2 544 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-205ENST00000538545 TCTEX1D1Q8N7M0 179 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 TCF19Q9Y242 345 aa11.48□□□□□ -0.57
ACTN1-205ENST00000538545 KRBOX1C9JBD0 128 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 ITGB1BP1O14713 200 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms