RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TMEM11P17152 192 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 VDAC1P21796 283 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CD1BP29016 333 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 LGALS7P47929 136 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 IAH1Q2TAA2 248 aaPredicted RBP8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 RBMS3Q6XE24 437 aaKnown RBP8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 C1orf229Q6ZS94 237 aaPredicted RBP8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 FAM219AQ8IW50 185 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 FOXRED2Q8IWF2 684 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 VSTM2AQ8TAG5 236 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 OSR1Q8TAX0 266 aaPredicted RBP8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 C2orf50Q96LR7 162 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 TMEM56Q96MV1 263 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ZNF436Q9C0F3 470 aaPredicted RBP8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 TMEM56-RWDD3S4R434 201 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 A0A0U1RQK1 487 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 LY6LH3BQJ8 138 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 L7N2F9 121 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 PROP1O75360 226 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 MOSP00540 346 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 IGKV1D-33P01593 117 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 IGKV1-33P01594 117 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SNRNP70P08621 437 aaKnown RBP8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 NUP62P37198 522 aaPredicted RBP8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 S100A10P60903 97 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 VAMP2P63027 116 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 EIF4EBP1Q13541 118 aaPredicted RBP8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ZNF585BQ52M93 769 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 LRTM2Q8N967 370 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 OR5AN1Q8NGI8 311 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 OR5M8Q8NGP6 311 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 RHOVQ96L33 236 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ENY2Q9NPA8 101 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ZFP57Q9NU63 452 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 C1RLQ9NZP8 487 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 MMP24Q9Y5R2 645 aa8.61□□□□□ -1.03
TNFRSF1A-211ENST00000538363 A0A1B0GU03 582 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 A0A1W2PPI3 338 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 MARCH11A6NNE9 402 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 OR2A4O95047 310 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 IFNA17P01571 189 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 PVALBP20472 110 aaPredicted RBP8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CD24P25063 80 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 PAX6P26367 422 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 RAP2BP61225 183 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 FGL1Q08830 312 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 MMDQ15546 238 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 LRRC75BQ2VPJ9 315 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 LRRC37A5PQ49AS3 106 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 TMEM177Q53S58 311 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 FAM120AOSQ5T036 256 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 VKORC1L1Q8N0U8 176 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 OR11H7Q8NGC8 314 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 LHFPL5Q8TAF8 219 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 THAP6Q8TBB0 222 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 C22orf15Q8WYQ4 148 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 DDB2Q92466 427 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 LSM10Q969L4 123 aaKnown RBP8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 GPR146Q96CH1 333 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 OR2A7Q96R45 310 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SSX3Q99909 188 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 RNF5Q99942 180 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 HINT2Q9BX68 163 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ZC4H2Q9NQZ6 224 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CACNG5Q9UF02 275 aa8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 LSM5Q9Y4Y9 91 aaKnown RBP8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 FLNAP21333 2647 aaKnown RBP8.6□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CEBPZOSA8MTT3 80 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SLC25A17O43808 307 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 MED6O75586 246 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 NXPH3O95157 252 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 VENTXO95231 258 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CNIH1O95406 144 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 GIPP09681 153 aaPredicted RBP8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 PET100P0DJ07 73 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CXCL3P19876 107 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 GNB1P62873 340 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 TREML4Q6UXN2 200 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CLEC9AQ6UXN8 241 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 IL17RELQ6ZVW7 336 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ZBTB8BQ8NAP8 495 aaPredicted RBP8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ABHD5Q8WTS1 349 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 C17orf50Q8WW18 174 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ASB13Q8WXK3 278 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 RASL11BQ9BPW5 248 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 COMMD5Q9GZQ3 224 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 RANGRFQ9HD47 186 aaPredicted RBP8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 TNFRSF19Q9NS68 423 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 TMEM140Q9NV12 185 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 FKBP11Q9NYL4 201 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 METTL1Q9UBP6 276 aaKnown RBP8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CACFD1Q9UGQ2 172 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 PITPNC1Q9UKF7 332 aa8.59□□□□□ -1.03
TNFRSF1A-211ENST00000538363 MED13LQ71F56 2210 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 H3BUX3 64 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 NBR2O15453 112 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 IGKV1-16P04430 117 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 HNRNPCP07910 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 FOSL1P15407 271 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms