RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 RPUSD1Q9UJJ7 312 aaKnown RBP9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 PCNX1Q96RV3 2341 aa9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 SAA2-SAA4A0A096LPE2 208 aa9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 A0A1W2PPE3 182 aa9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 SAA2P0DJI9 122 aaPredicted RBP9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 MAS1LP35410 378 aa9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 FGF8P55075 233 aaPredicted RBP9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 RPP30P78346 268 aaKnown RBP9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 VKORC1L1Q8N0U8 176 aa9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 CA5BP1Q8WTZ4 195 aa9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 RAB39BQ96DA2 213 aa9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 P2RX4Q99571 388 aa9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 COL25A1Q9BXS0 654 aaPredicted RBP9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 TMEM140Q9NV12 185 aa9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 TANC2Q9HCD6 1990 aa9.4□□□□□ -0.91
SLC28A1-204ENST00000538177 TRAV3A0A0B4J244 114 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 TRAV38-1A0A0B4J264 116 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 hADV38S2A0JD32 116 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 NKX6-3A6NJ46 265 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 NDUFA2O43678 99 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 MMP23AO75900 390 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 TSPAN9O75954 239 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 RPS16P62249 146 aaKnown RBP9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 RBPJQ06330 500 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 TFF3Q07654 80 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 SLC35E3Q7Z769 313 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 ZNF383Q8NA42 475 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 RND1Q92730 232 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 ISOC2Q96AB3 205 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 TVP23CQ96ET8 276 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 WFIKKN1Q96NZ8 548 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 NPCDR1Q9BY65 106 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 VAX2Q9UIW0 290 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 KLF2Q9Y5W3 355 aaPredicted RBP9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 LINC00312Q9Y6C7 94 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 A0A087WWC5 75 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 CTXND1A0A1B0GTU2 59 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 A0A1W2PPE2 198 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 A0A1W2PPH5 198 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 ZFP92A6NM28 416 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 VSTM5A8MXK1 200 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 CEBPGP53567 150 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 MEF2CQ06413 473 aaPredicted RBP9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 POU2AF1Q16633 256 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 FAM90A2PQ658T7 463 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 SLC25A48Q6ZT89 311 aaKnown RBP9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 LYG1Q8N1E2 194 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 ZCCHC24Q8N2G6 241 aaKnown RBP9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 ZNF709Q8N972 641 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 OR10A7Q8NGE5 316 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 LHX4Q969G2 390 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 VKORC1Q9BQB6 163 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 NIPSNAP3BQ9BS92 247 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 GGACTQ9BVM4 153 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 SAV1Q9H4B6 383 aaPredicted RBP9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 WDR83OSQ9Y284 106 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 MSRB2Q9Y3D2 182 aa9.39□□□□□ -0.91
SLC28A1-204ENST00000538177 RAI1Q7Z5J4 1906 aaPredicted RBP9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 BSNQ9UPA5 3926 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 TRGV8A0A0C4DH27 118 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 TMEM178BH3BS89 294 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 TMPRSS2O15393 492 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 GFRA3O60609 400 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 IFNA1P01562 189 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 DLK1P80370 383 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 TLE1Q04724 770 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 HABP2Q14520 560 aaPredicted RBP9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 FFAR4Q5NUL3 377 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 ADAM5Q6NVV9 412 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 C1orf87Q8N0U7 546 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 Q8N7P7 452 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 OR10G9Q8NGN4 311 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 OR10G7Q8NGN6 311 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 ZCCHC14Q8WYQ9 949 aaKnown RBP9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 RHOVQ96L33 236 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 NGBQ9NPG2 151 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 HEYLQ9NQ87 328 aaPredicted RBP9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 BIN3Q9NQY0 253 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 TCF19Q9Y242 345 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 ROS1P08922 2347 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 PTPRQQ9UMZ3 2332 aa9.38□□□□□ -0.91
SLC28A1-204ENST00000538177 C15orf61A6NNL5 157 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 C17orf112F2Z3M2 114 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 TNFRSF13BO14836 293 aaPredicted RBP9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 IFNA10P01566 189 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 NDUFB7P17568 137 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 RAB5AP20339 215 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 CD1BP29016 333 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 TAGLN2P37802 199 aaKnown RBP9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 TMPRSS3P57727 454 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 RAB5BP61020 215 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 RAB11AP62491 216 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 HNF4GQ14541 408 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 RBMS3Q6XE24 437 aaKnown RBP9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 FAM24BQ8N5W8 94 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 ACTR3CQ9C0K3 210 aaPredicted RBP9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 SAP30LQ9HAJ7 183 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 TMEM14BQ9NUH8 114 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 SLC25A10Q9UBX3 287 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms