RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 CMTM3Q96MX0 182 aa16.58■□□□□ 0.24
CCDC78-215ENST00000538176 SPIN2AQ99865 258 aa16.58■□□□□ 0.24
CCDC78-215ENST00000538176 B9D2Q9BPU9 175 aa16.58■□□□□ 0.24
CCDC78-215ENST00000538176 SPIN2BQ9BPZ2 258 aa16.58■□□□□ 0.24
CCDC78-215ENST00000538176 ZNF256Q9Y2P7 627 aaPredicted RBP16.58■□□□□ 0.24
CCDC78-215ENST00000538176 IGKV1D-13A0A0B4J2D9 117 aa16.57■□□□□ 0.24
CCDC78-215ENST00000538176 TRIM64CA6NLI5 447 aa16.57■□□□□ 0.24
CCDC78-215ENST00000538176 IGKV1-13P0DP09 117 aa16.57■□□□□ 0.24
CCDC78-215ENST00000538176 CD69Q07108 199 aa16.57■□□□□ 0.24
CCDC78-215ENST00000538176 TNXAQ16473 311 aa16.57■□□□□ 0.24
CCDC78-215ENST00000538176 GVQW1Q8N7I0 195 aa16.57■□□□□ 0.24
CCDC78-215ENST00000538176 SRSF12Q8WXF0 261 aaKnown RBP16.57■□□□□ 0.24
CCDC78-215ENST00000538176 TINAGL1Q9GZM7 467 aaPredicted RBP16.57■□□□□ 0.24
CCDC78-215ENST00000538176 ALX4Q9H161 411 aaPredicted RBP16.57■□□□□ 0.24
CCDC78-215ENST00000538176 IGHV4OR15-8A0A075B7B6 117 aa16.56■□□□□ 0.24
CCDC78-215ENST00000538176 A0A087WW49 117 aa16.56■□□□□ 0.24
CCDC78-215ENST00000538176 HRASP01112 189 aa16.56■□□□□ 0.24
CCDC78-215ENST00000538176 IGHV3-11P01762 117 aa16.56■□□□□ 0.24
CCDC78-215ENST00000538176 ACSM6Q6P461 480 aa16.56■□□□□ 0.24
CCDC78-215ENST00000538176 SLC25A42Q86VD7 318 aa16.56■□□□□ 0.24
CCDC78-215ENST00000538176 TCTEX1D2Q8WW35 142 aa16.56■□□□□ 0.24
CCDC78-215ENST00000538176 ACOT12Q8WYK0 555 aa16.56■□□□□ 0.24
CCDC78-215ENST00000538176 SLC25A46Q96AG3 418 aa16.56■□□□□ 0.24
CCDC78-215ENST00000538176 ELOVL1Q9BW60 279 aa16.56■□□□□ 0.24
CCDC78-215ENST00000538176 MPPED1O15442 326 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 OR2A4O95047 310 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 PPYP01298 95 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 OR9G9P0C7N8 305 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 SAA1P0DJI8 122 aaPredicted RBP16.55■□□□□ 0.24
CCDC78-215ENST00000538176 MAS1LP35410 378 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 SLURP1P55000 103 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 RPL30P62888 115 aaKnown RBP16.55■□□□□ 0.24
CCDC78-215ENST00000538176 EIF4EBP1Q13541 118 aaPredicted RBP16.55■□□□□ 0.24
CCDC78-215ENST00000538176 MRGPRG-AS1Q2M3A8 158 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 FAM209BQ5JX69 171 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 TMEM69Q5SWH9 247 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 SAMD12Q8N8I0 201 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 OR6Q1Q8NGQ2 317 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 OR13F1Q8NGS4 319 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 OR2A7Q96R45 310 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 OR4C12Q96R67 309 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 ZNF430Q9H8G1 570 aaPredicted RBP16.55■□□□□ 0.24
CCDC78-215ENST00000538176 IFT46Q9NQC8 304 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 COA4Q9NYJ1 87 aa16.55■□□□□ 0.24
CCDC78-215ENST00000538176 LSM4Q9Y4Z0 139 aaKnown RBP16.55■□□□□ 0.24
CCDC78-215ENST00000538176 SMIM31A0A1B0GVY4 71 aa16.54■□□□□ 0.24
CCDC78-215ENST00000538176 SAP30O75446 220 aa16.54■□□□□ 0.24
CCDC78-215ENST00000538176 NHLRC4P0CG21 123 aaPredicted RBP16.54■□□□□ 0.24
CCDC78-215ENST00000538176 LSM3P62310 102 aaKnown RBP16.54■□□□□ 0.24
CCDC78-215ENST00000538176 CATR1Q13166 79 aa16.54■□□□□ 0.24
CCDC78-215ENST00000538176 TATDN3Q17R31 274 aa16.54■□□□□ 0.24
CCDC78-215ENST00000538176 IDO2Q6ZQW0 420 aa16.54■□□□□ 0.24
CCDC78-215ENST00000538176 SECTM1Q8WVN6 248 aa16.54■□□□□ 0.24
CCDC78-215ENST00000538176 TAS2R8Q9NYW2 309 aa16.54■□□□□ 0.24
CCDC78-215ENST00000538176 TNCP24821 2201 aa16.53■□□□□ 0.24
CCDC78-215ENST00000538176 RBFOX2O43251 390 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC78-215ENST00000538176 VAX1Q5SQQ9 334 aa16.53■□□□□ 0.24
CCDC78-215ENST00000538176 DHRS11Q6UWP2 260 aa16.53■□□□□ 0.24
CCDC78-215ENST00000538176 ADAD2Q8NCV1 583 aaKnown RBP16.53■□□□□ 0.24
CCDC78-215ENST00000538176 CD300LFQ8TDQ1 290 aa16.53■□□□□ 0.24
CCDC78-215ENST00000538176 FUNDC2Q9BWH2 189 aa16.53■□□□□ 0.24
CCDC78-215ENST00000538176 SLC5A7Q9GZV3 580 aa16.53■□□□□ 0.24
CCDC78-215ENST00000538176 CCL28Q9NRJ3 127 aa16.53■□□□□ 0.24
CCDC78-215ENST00000538176 SORL1Q92673 2214 aa16.52■□□□□ 0.24
CCDC78-215ENST00000538176 FAM223BA6NKX1 122 aa16.52■□□□□ 0.24
CCDC78-215ENST00000538176 KBTBD11O94819 623 aa16.52■□□□□ 0.24
CCDC78-215ENST00000538176 PRSS3P35030 304 aa16.52■□□□□ 0.24
CCDC78-215ENST00000538176 TGFBR1P36897 503 aa16.52■□□□□ 0.24
CCDC78-215ENST00000538176 TAS2R46P59540 309 aa16.52■□□□□ 0.24
CCDC78-215ENST00000538176 ZNF343Q6P1L6 599 aa16.52■□□□□ 0.24
CCDC78-215ENST00000538176 FAM223AQ8IWN6 122 aa16.52■□□□□ 0.24
CCDC78-215ENST00000538176 TTC9CQ8N5M4 171 aa16.52■□□□□ 0.24
CCDC78-215ENST00000538176 OR4A5Q8NH83 315 aa16.52■□□□□ 0.24
CCDC78-215ENST00000538176 TMEM167AQ8TBQ9 72 aa16.52■□□□□ 0.24
CCDC78-215ENST00000538176 PEF1Q9UBV8 284 aaKnown RBP16.52■□□□□ 0.24
CCDC78-215ENST00000538176 APOA1P02647 267 aa16.51■□□□□ 0.23
CCDC78-215ENST00000538176 TAS2R20P59543 309 aa16.51■□□□□ 0.23
CCDC78-215ENST00000538176 OR2B11Q5JQS5 317 aa16.51■□□□□ 0.23
CCDC78-215ENST00000538176 PUSL1Q8N0Z8 303 aaKnown RBP16.51■□□□□ 0.23
CCDC78-215ENST00000538176 SNAPC3Q92966 411 aa16.51■□□□□ 0.23
CCDC78-215ENST00000538176 PRR25Q96S07 402 aa16.51■□□□□ 0.23
CCDC78-215ENST00000538176 HPRT1P00492 218 aa16.5■□□□□ 0.23
CCDC78-215ENST00000538176 NAT1P18440 290 aa16.5■□□□□ 0.23
CCDC78-215ENST00000538176 HERV-K104P61576 105 aa16.5■□□□□ 0.23
CCDC78-215ENST00000538176 SPAG16Q8N0X2 631 aa16.5■□□□□ 0.23
CCDC78-215ENST00000538176 ANAPC10Q9UM13 185 aa16.5■□□□□ 0.23
CCDC78-215ENST00000538176 ZNF257Q9Y2Q1 563 aa16.5■□□□□ 0.23
CCDC78-215ENST00000538176 TRBV9A0A0B4J1U6 114 aa16.49■□□□□ 0.23
CCDC78-215ENST00000538176 LY86O95711 162 aa16.49■□□□□ 0.23
CCDC78-215ENST00000538176 DHFRP00374 187 aa16.49■□□□□ 0.23
CCDC78-215ENST00000538176 PTHLHP12272 177 aa16.49■□□□□ 0.23
CCDC78-215ENST00000538176 RORCP51449 518 aa16.49■□□□□ 0.23
CCDC78-215ENST00000538176 BRWD1-AS2P59051 145 aa16.49■□□□□ 0.23
CCDC78-215ENST00000538176 TAS2R31P59538 309 aa16.49■□□□□ 0.23
CCDC78-215ENST00000538176 DYRK1AQ13627 763 aa16.49■□□□□ 0.23
CCDC78-215ENST00000538176 KLF5Q13887 457 aaPredicted RBP16.49■□□□□ 0.23
CCDC78-215ENST00000538176 NECAP1Q8NC96 275 aa16.49■□□□□ 0.23
CCDC78-215ENST00000538176 BET1LQ9NYM9 111 aa16.49■□□□□ 0.23
CCDC78-215ENST00000538176 EHFQ9NZC4 300 aa16.49■□□□□ 0.23
CCDC78-215ENST00000538176 SMAD5-AS1Q9Y6J3 95 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms