RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 LINC00052Q96N35 136 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 ARL6Q9H0F7 186 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 TMEM140Q9NV12 185 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 MARCH11A6NNE9 402 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 MOSP00540 346 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 RPL8P62917 257 aaKnown RBP5.87□□□□□ -1.47
MSH6-209ENST00000538136 PALMDQ9NP74 551 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 BOLA1Q9Y3E2 137 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 FBN1P35555 2871 aaKnown RBP5.87□□□□□ -1.47
MSH6-209ENST00000538136 A0A0B4J2A0 478 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 RAB6AP20340 208 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 CX3CL1P78423 397 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 MEF2CQ06413 473 aaPredicted RBP5.86□□□□□ -1.47
MSH6-209ENST00000538136 ZNF616Q08AN1 781 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 DYRK1AQ13627 763 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 FCN2Q15485 313 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 CXorf66Q5JRM2 361 aaPredicted RBP5.86□□□□□ -1.47
MSH6-209ENST00000538136 FOXC2Q99958 501 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 SRRQ9GZT4 340 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 OR51J1Q9H342 316 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 SHPKQ9UHJ6 478 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 HSPB11Q9Y547 144 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 PSMB11A5LHX3 300 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 A6NHS1 94 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 CA11O75493 328 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 PGLYRP1O75594 196 aaPredicted RBP5.86□□□□□ -1.47
MSH6-209ENST00000538136 MRPS10P82664 201 aaKnown RBP5.86□□□□□ -1.47
MSH6-209ENST00000538136 RPEL1Q2QD12 228 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 TPTE2P1Q5T6R2 138 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 PPP1R27Q86WC6 154 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 HOGA1Q86XE5 327 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 Q8N7P7 452 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 GPX8Q8TED1 209 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 KPTNQ9Y664 436 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 LINC00473A8K010 186 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 M0QZ24 198 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 SCAF4O95104 1147 aaKnown RBP5.86□□□□□ -1.47
MSH6-209ENST00000538136 SPDEFO95238 335 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 SAA1P0DJI8 122 aaPredicted RBP5.86□□□□□ -1.47
MSH6-209ENST00000538136 GATA2P23769 480 aaPredicted RBP5.86□□□□□ -1.47
MSH6-209ENST00000538136 GATA4P43694 442 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 DHRS2Q13268 280 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 DYNAPQ8N1N2 210 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 KLHDC1Q8N7A1 406 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.86□□□□□ -1.47
MSH6-209ENST00000538136 RITA1Q96K30 269 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 TP53RKQ96S44 253 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 SCPEP1Q9HB40 452 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 LPAR3Q9UBY5 353 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 JPT1Q9UK76 154 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 OR51B2Q9Y5P1 312 aa5.86□□□□□ -1.47
MSH6-209ENST00000538136 FAM24AA6NFZ4 105 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 OR2T8A6NH00 312 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 LINC01548A6NM66 108 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 CYB5BO43169 146 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 PAX1P15863 534 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 SPNP16150 400 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 MLANAQ16655 118 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 CD200R1LQ6Q8B3 271 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 CLEC18BQ6UXF7 455 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 ETV3LQ6ZN32 361 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 LDLRAD3Q86YD5 345 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 LYSMD2Q8IV50 215 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 RBM14Q96PK6 669 aaKnown RBP5.85□□□□□ -1.47
MSH6-209ENST00000538136 SPIN2AQ99865 258 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 SPIN2BQ9BPZ2 258 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 DNAJC9-AS1A6NH13 148 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 POM121CA8CG34 1229 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 OVOL3O00110 214 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 SAP30O75446 220 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 ZNF137PP52743 207 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 RPL23AP62750 156 aaKnown RBP5.85□□□□□ -1.47
MSH6-209ENST00000538136 ZNF79Q15937 498 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 TRAT1Q6PIZ9 186 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 Q6ZS46 218 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 STX12Q86Y82 276 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 SAXO1Q8IYX7 474 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 IGKV1-6A0A0C4DH72 117 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 CRYM-AS1A6NIL9 109 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 NBR2O15453 112 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 IFNA5P01569 189 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 THBS3P49746 956 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 UBE2E1P51965 193 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 EMP1P54849 157 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 RAG2P55895 527 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 HERPUD1Q15011 391 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 C17orf58Q2M2W7 97 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 FAM76BQ5HYJ3 339 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 GGNBP1Q5YKI7 109 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 STXBP6Q8NFX7 210 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 RNF166Q96A37 237 aaPredicted RBP5.85□□□□□ -1.47
MSH6-209ENST00000538136 SLC35E1Q96K37 410 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 TMEM56Q96MV1 263 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 VSIG4Q9Y279 399 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 ALG5Q9Y673 324 aa5.85□□□□□ -1.47
MSH6-209ENST00000538136 MPTX1A8MV57 137 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 NUPL2O15504 423 aaKnown RBP5.84□□□□□ -1.47
MSH6-209ENST00000538136 OR2C1O95371 312 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 MPZP25189 248 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 KIAA0141Q14154 515 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms