RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 UCP1P25874 307 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 NPY1RP25929 384 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 GPR6P46095 362 aaPredicted RBP8.99□□□□□ -0.97
RTN3-208ENST00000537981 CRYBA4P53673 196 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 OR5B3Q8NH48 314 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 CHRDL1Q9BU40 450 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 GPR27Q9NS67 375 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 EPOPA6NHQ4 379 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 C9orf172C9J069 976 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 H0Y8X5 98 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 TMPRSS2O15393 492 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 SYNGR2O43760 224 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 GP1BBP13224 206 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 SRD5A2P31213 254 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 RAB9AP51151 201 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 OR1D5P58170 312 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 SLC38A11Q08AI6 406 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 FUT7Q11130 342 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 FXYD3Q14802 87 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 TNXAQ16473 311 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 C16orf47Q6ZP98 133 aaPredicted RBP8.99□□□□□ -0.97
RTN3-208ENST00000537981 RDH5Q92781 318 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 TNRC6AQ8NDV7 1962 aaKnown RBP8.99□□□□□ -0.97
RTN3-208ENST00000537981 IGKV1-6A0A0C4DH72 117 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 LIPT2A6NK58 231 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 SERPINE2P07093 398 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 UQCRFS1P47985 274 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 TRIP6Q15654 476 aaKnown RBP8.98□□□□□ -0.97
RTN3-208ENST00000537981 GABRA6Q16445 453 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 KIAA0895LQ68EN5 471 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 MRPL54Q6P161 138 aaKnown RBP8.98□□□□□ -0.97
RTN3-208ENST00000537981 OR4P4Q8NGL7 312 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 BORCS7Q96B45 105 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 HS3ST6Q96QI5 342 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 TIMM29Q9BSF4 260 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 IL36BQ9NZH7 164 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 SMPXQ9UHP9 88 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 PTPRSQ13332 1948 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 DAP3P51398 398 aaKnown RBP8.98□□□□□ -0.97
RTN3-208ENST00000537981 FOXL2P58012 376 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 RSPO1Q2MKA7 263 aaPredicted RBP8.98□□□□□ -0.97
RTN3-208ENST00000537981 UFSP1Q6NVU6 142 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 MMD2Q8IY49 270 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 SLC39A11Q8N1S5 342 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 TSTD1Q8NFU3 115 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 OR10P1Q8NGE3 313 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 TSACCQ96A04 125 aaPredicted RBP8.98□□□□□ -0.97
RTN3-208ENST00000537981 QTRT1Q9BXR0 403 aaKnown RBP8.98□□□□□ -0.97
RTN3-208ENST00000537981 PRTFDC1Q9NRG1 225 aa8.98□□□□□ -0.97
RTN3-208ENST00000537981 PNO1Q9NRX1 252 aaKnown RBP8.98□□□□□ -0.97
RTN3-208ENST00000537981 MUC22E2RYF6 1773 aaPredicted RBP8.97□□□□□ -0.97
RTN3-208ENST00000537981 FAM181BA6NEQ2 426 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 RRHO14718 337 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 ZNHIT1O43257 154 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 IGKV1-5P01602 117 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 FBLP22087 321 aaKnown RBP8.97□□□□□ -0.97
RTN3-208ENST00000537981 MEF2CQ06413 473 aaPredicted RBP8.97□□□□□ -0.97
RTN3-208ENST00000537981 SRSF7Q16629 238 aaKnown RBP eCLIP8.97□□□□□ -0.97
RTN3-208ENST00000537981 SLC23A3Q6PIS1 610 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 DNM1P34Q6PK57 102 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 TMEM136Q6ZRR5 245 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 LMX1AQ8TE12 382 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 ZNF442Q9H7R0 627 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 DEPPQ9NTK1 212 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 IL36GQ9NZH8 169 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 GAGE10A6NGK3 116 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 C2orf70A6NJV1 201 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 C17orf112F2Z3M2 114 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 M0R1X1 148 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 PGLYRP1O75594 196 aaPredicted RBP8.97□□□□□ -0.97
RTN3-208ENST00000537981 HAND1O96004 215 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 S100GP29377 79 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 ARF6P62330 175 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 SCGB2A2Q13296 93 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 ZNF77Q15935 545 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 HIST3H3Q16695 136 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 SPINK9Q5DT21 86 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 OR1F12Q8NHA8 337 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 ABHD14BQ96IU4 210 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 CCDC3Q9BQI4 270 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 TPPP3Q9BW30 176 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 TECRQ9NZ01 308 aaKnown RBP8.97□□□□□ -0.97
RTN3-208ENST00000537981 IL36RNQ9UBH0 155 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 BRWD1Q9NSI6 2320 aa8.97□□□□□ -0.97
RTN3-208ENST00000537981 C7orf71A4D174 169 aa8.96□□□□□ -0.97
RTN3-208ENST00000537981 RAMP3O60896 148 aa8.96□□□□□ -0.97
RTN3-208ENST00000537981 CA1P00915 261 aaPredicted RBP8.96□□□□□ -0.97
RTN3-208ENST00000537981 STAG3L2P0CL84 134 aa8.96□□□□□ -0.97
RTN3-208ENST00000537981 FASLGP48023 281 aa8.96□□□□□ -0.97
RTN3-208ENST00000537981 RNPS1Q15287 305 aaKnown RBP8.96□□□□□ -0.97
RTN3-208ENST00000537981 DCAF12Q5T6F0 453 aa8.96□□□□□ -0.97
RTN3-208ENST00000537981 ZNF439Q8NDP4 499 aa8.96□□□□□ -0.97
RTN3-208ENST00000537981 RNASE7Q9H1E1 156 aaKnown RBP8.96□□□□□ -0.97
RTN3-208ENST00000537981 WDR54Q9H977 334 aa8.96□□□□□ -0.97
RTN3-208ENST00000537981 HES4Q9HCC6 221 aa8.96□□□□□ -0.97
RTN3-208ENST00000537981 TMEM38BQ9NVV0 291 aa8.96□□□□□ -0.97
RTN3-208ENST00000537981 ARL2-SNX15V9GYD0 113 aa8.96□□□□□ -0.97
RTN3-208ENST00000537981 SAA2-SAA4A0A096LPE2 208 aa8.96□□□□□ -0.98
RTN3-208ENST00000537981 DHRS3O75911 302 aa8.96□□□□□ -0.98
RTN3-208ENST00000537981 INO80CQ6PI98 192 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms