RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ERRFI1Q9UJM3 462 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 ERG28Q9UKR5 140 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 IGKV1D-43A0A0B4J1Z2 117 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 SCO2A0A1W2PP80 73 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 NPIPB13A6NJU9 1138 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 NPIPB4C9JG80 1138 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 FAM90A26D6RGX4 464 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 PGLYRP1O75594 196 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 GRB2P62993 217 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 TIMM23BQ5SRD1 257 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 DHRS13Q6UX07 377 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 BAHD1Q8TBE0 780 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 NPCDR1Q9BY65 106 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 ZNF442Q9H7R0 627 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 OSTCQ9NRP0 149 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 CYSLTR1Q9Y271 337 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 TNFRSF18Q9Y5U5 241 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 TRGV10A0A0A0MS01 117 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 LEPROTL1O95214 131 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 CELA3AP09093 270 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 FAM87AP0C7U9 286 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 RPL31P62899 125 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 GPM6BQ13491 265 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 C2orf91Q6ZV80 131 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 DOLPP1Q86YN1 238 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 OR4A16Q8NH70 328 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 ZNF524Q96C55 264 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 MAP1LC3CQ9BXW4 147 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 SERTAD4Q9NUC0 356 aa7.17□□□□□ -1.26
SRGAP1-202ENST00000537556 TMED7-TICAM2A0A0A6YYA0 188 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 ZNF716A6NP11 495 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 HRKO00198 91 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 PDCD6O75340 191 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 SNRNP200O75643 2136 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 UTS2O95399 124 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 EML2O95834 649 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 CA1P00915 261 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 OR9G9P0C7N8 305 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 MGST1P10620 155 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 FUT7Q11130 342 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 TMEM215Q68D42 235 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 CXCL17Q6UXB2 119 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 PRSS41Q7RTY9 318 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 SPACA3Q8IXA5 215 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 GPHA2Q96T91 129 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 TIMM29Q9BSF4 260 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 CCL28Q9NRJ3 127 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 LRRC30A6NM36 301 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 AGFG2O95081 481 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 CNIH1O95406 144 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 OR5AL1P0C617 328 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 SLC35B1P78383 322 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 TMEM52BQ4KMG9 183 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 SAMD5Q5TGI4 173 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 SPATA31B1PQ5VZV4 182 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 PARM1Q6UWI2 310 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 Q6ZRM9 215 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 Q6ZS49 121 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 ZDHHC23Q8IYP9 409 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 OSR2Q8N2R0 312 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 OR10G6Q8NH81 332 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 WIPF2Q8TF74 440 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 GRAMD2BQ96HH9 432 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 DGAT2Q96PD7 388 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 PIGLQ9Y2B2 252 aa7.16□□□□□ -1.26
SRGAP1-202ENST00000537556 IZUMO1RA6ND01 250 aa7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 DUSP11O75319 330 aaKnown RBP7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 CXorf1O96002 111 aa7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 CCL15Q16663 113 aa7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 FAM69BQ5VUD6 431 aa7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 KIR3DL3Q8N743 410 aa7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 OR10D3Q8NH80 312 aa7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 RAB37Q96AX2 223 aa7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 RAX2Q96IS3 184 aa7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 VGLL1Q99990 258 aa7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 NAA38Q9BRA0 125 aaKnown RBP7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 SPXQ9BT56 116 aa7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 SPANXB1Q9NS25 103 aaPredicted RBP7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 C19orf25Q9UFG5 118 aaPredicted RBP7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 COL4A2P08572 1712 aa7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 TDRD6O60522 2096 aaKnown RBP7.15□□□□□ -1.26
SRGAP1-202ENST00000537556 CEACAM16Q2WEN9 425 aa7.15□□□□□ -1.27
SRGAP1-202ENST00000537556 TTC9CQ8N5M4 171 aa7.15□□□□□ -1.27
SRGAP1-202ENST00000537556 OR52E5Q8NH55 327 aa7.15□□□□□ -1.27
SRGAP1-202ENST00000537556 C11orf52Q96A22 123 aa7.15□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM131CQ96AQ9 280 aa7.15□□□□□ -1.27
SRGAP1-202ENST00000537556 CHCHD1Q96BP2 118 aaKnown RBP7.15□□□□□ -1.27
SRGAP1-202ENST00000537556 RNF183Q96D59 192 aa7.15□□□□□ -1.27
SRGAP1-202ENST00000537556 COL25A1Q9BXS0 654 aaPredicted RBP7.15□□□□□ -1.27
SRGAP1-202ENST00000537556 TECRQ9NZ01 308 aaKnown RBP7.15□□□□□ -1.27
SRGAP1-202ENST00000537556 RALYQ9UKM9 306 aaKnown RBP7.15□□□□□ -1.27
SRGAP1-202ENST00000537556 SMIM27A0A1W2PRY6 76 aa7.14□□□□□ -1.27
SRGAP1-202ENST00000537556 HELTA6NFD8 242 aa7.14□□□□□ -1.27
SRGAP1-202ENST00000537556 MS4A18H0YCH9 400 aa7.14□□□□□ -1.27
SRGAP1-202ENST00000537556 TUSC2O75896 110 aa7.14□□□□□ -1.27
SRGAP1-202ENST00000537556 NEURL1O76050 574 aa7.14□□□□□ -1.27
SRGAP1-202ENST00000537556 OR7C1O76099 320 aaPredicted RBP7.14□□□□□ -1.27
SRGAP1-202ENST00000537556 CA3P07451 260 aa7.14□□□□□ -1.27
SRGAP1-202ENST00000537556 PSG2P11465 335 aa7.14□□□□□ -1.27
SRGAP1-202ENST00000537556 SRSF6Q13247 344 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms