RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 IGLV2-14P01704 120 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 ECI1P42126 302 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 RAB9AP51151 201 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 RPS16P62249 146 aaKnown RBP9.66□□□□□ -0.86
PRKDC-207ENST00000536483 SSBP2P81877 361 aaPredicted RBP9.66□□□□□ -0.86
PRKDC-207ENST00000536483 EIF4EBP1Q13541 118 aaPredicted RBP9.66□□□□□ -0.86
PRKDC-207ENST00000536483 C9orf66Q5T8R8 295 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 PYHIN1Q6K0P9 492 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 OVCH2Q7RTZ1 564 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 PPP1R27Q86WC6 154 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 ZNF645Q8N7E2 425 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 POC5Q8NA72 575 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 OR5M8Q8NGP6 311 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 DIRAS2Q96HU8 199 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 TMEM68Q96MH6 324 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 PARP11Q9NR21 331 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 METTL1Q9UBP6 276 aaKnown RBP9.66□□□□□ -0.86
PRKDC-207ENST00000536483 WSB1Q9Y6I7 421 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 V9GYH0 126 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 STAB2Q8WWQ8 2551 aa9.65□□□□□ -0.86
PRKDC-207ENST00000536483 SRRM4A7MD48 611 aaKnown RBP9.65□□□□□ -0.86
PRKDC-207ENST00000536483 LINC00473A8K010 186 aa9.65□□□□□ -0.86
PRKDC-207ENST00000536483 SEC14L6B5MCN3 397 aa9.65□□□□□ -0.86
PRKDC-207ENST00000536483 SOX15O60248 233 aa9.65□□□□□ -0.86
PRKDC-207ENST00000536483 CBX5P45973 191 aa9.65□□□□□ -0.86
PRKDC-207ENST00000536483 RTL8BQ17RB0 113 aa9.65□□□□□ -0.86
PRKDC-207ENST00000536483 MRGPRG-AS1Q2M3A8 158 aa9.65□□□□□ -0.86
PRKDC-207ENST00000536483 TEX45Q8NA69 505 aa9.65□□□□□ -0.86
PRKDC-207ENST00000536483 OSR1Q8TAX0 266 aaPredicted RBP9.65□□□□□ -0.86
PRKDC-207ENST00000536483 CHAC2Q8WUX2 184 aa9.65□□□□□ -0.86
PRKDC-207ENST00000536483 S100A16Q96FQ6 103 aaKnown RBP9.65□□□□□ -0.86
PRKDC-207ENST00000536483 ANAPC10Q9UM13 185 aa9.65□□□□□ -0.86
PRKDC-207ENST00000536483 FOXA2Q9Y261 457 aaPredicted RBP9.65□□□□□ -0.86
PRKDC-207ENST00000536483 VSIG4Q9Y279 399 aa9.65□□□□□ -0.86
PRKDC-207ENST00000536483 RBMX2Q9Y388 322 aaKnown RBP9.65□□□□□ -0.86
PRKDC-207ENST00000536483 SACSQ9NZJ4 4579 aa9.65□□□□□ -0.86
PRKDC-207ENST00000536483 ARPC1BO15143 372 aaKnown RBP9.64□□□□□ -0.87
PRKDC-207ENST00000536483 NAT1P18440 290 aa9.64□□□□□ -0.87
PRKDC-207ENST00000536483 UBE2KP61086 200 aa9.64□□□□□ -0.87
PRKDC-207ENST00000536483 ASAH1Q13510 395 aa9.64□□□□□ -0.87
PRKDC-207ENST00000536483 UBE2NLQ5JXB2 153 aa9.64□□□□□ -0.87
PRKDC-207ENST00000536483 TMEM65Q6PI78 240 aa9.64□□□□□ -0.87
PRKDC-207ENST00000536483 BEST4Q8NFU0 473 aa9.64□□□□□ -0.87
PRKDC-207ENST00000536483 SDHCQ99643 169 aaPredicted RBP9.64□□□□□ -0.87
PRKDC-207ENST00000536483 MIXL1Q9H2W2 232 aa9.64□□□□□ -0.87
PRKDC-207ENST00000536483 TPSG1Q9NRR2 321 aa9.64□□□□□ -0.87
PRKDC-207ENST00000536483 RBM7Q9Y580 266 aaKnown RBP9.64□□□□□ -0.87
PRKDC-207ENST00000536483 DYNC2H1Q8NCM8 4307 aaKnown RBP9.63□□□□□ -0.87
PRKDC-207ENST00000536483 IGKV1D-13A0A0B4J2D9 117 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 C3orf84H3BNL1 204 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 H3BUA1 57 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 SLC25A17O43808 307 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 CA2P00918 260 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 IGKV1-13P0DP09 117 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 NFYAP23511 347 aaPredicted RBP9.63□□□□□ -0.87
PRKDC-207ENST00000536483 CBX3Q13185 183 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 PLGLAQ15195 96 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 LAX1Q8IWV1 398 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 ZBTB34Q8NCN2 500 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 BVESQ8NE79 360 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 C15orf40Q8WUR7 153 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 GIMAP1Q8WWP7 306 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 HARBI1Q96MB7 349 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 HSD17B10Q99714 261 aaKnown RBP9.63□□□□□ -0.87
PRKDC-207ENST00000536483 SLA2Q9H6Q3 261 aa9.63□□□□□ -0.87
PRKDC-207ENST00000536483 SHOXO15266 292 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 IL7P13232 177 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 BRWD1-AS2P59051 145 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 RPL30P62888 115 aaKnown RBP9.62□□□□□ -0.87
PRKDC-207ENST00000536483 FXYD3Q14802 87 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 ZNF79Q15937 498 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 ACTBL2Q562R1 376 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 ASPHD1Q5U4P2 390 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 DHRS11Q6UWP2 260 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 ZNF66Q6ZN08 573 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 GVQW1Q8N7I0 195 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 LFNGQ8NES3 379 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 OR11H1Q8NG94 326 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 OR5AP2Q8NGF4 316 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 ARPC1AQ92747 370 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 SNAPC3Q92966 411 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 RHOVQ96L33 236 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 GNB4Q9HAV0 340 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 COMMD3Q9UBI1 195 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 ZNF256Q9Y2P7 627 aaPredicted RBP9.62□□□□□ -0.87
PRKDC-207ENST00000536483 PRELID3BQ9Y3B1 194 aa9.62□□□□□ -0.87
PRKDC-207ENST00000536483 DNAH7Q8WXX0 4024 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 hCG_2014768A0A024R1R8 64 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 A0A1W2PN81 502 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 HNRNPCP07910 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
PRKDC-207ENST00000536483 OR8U8P0C7N1 319 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 CHRNA7P36544 502 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 ZNF616Q08AN1 781 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 PJVKQ0ZLH3 352 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 PRSS8Q16651 343 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 ECSCRQ19T08 205 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 VMA21Q3ZAQ7 101 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 PYDC2Q56P42 97 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 MZT2BQ6NZ67 158 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 UNQ5815/PRO19632Q6UWF5 114 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms