RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 PSG5Q15238 335 aa12.78□□□□□ -0.36
ATL3-202ENST00000535789 VAX1Q5SQQ9 334 aa12.78□□□□□ -0.36
ATL3-202ENST00000535789 OVCH2Q7RTZ1 564 aa12.78□□□□□ -0.36
ATL3-202ENST00000535789 ZNF695Q8IW36 515 aa12.78□□□□□ -0.36
ATL3-202ENST00000535789 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.78□□□□□ -0.36
ATL3-202ENST00000535789 OR5H2Q8NGV7 314 aa12.78□□□□□ -0.36
ATL3-202ENST00000535789 OR10J5Q8NHC4 309 aa12.78□□□□□ -0.36
ATL3-202ENST00000535789 GHITMQ9H3K2 345 aa12.78□□□□□ -0.36
ATL3-202ENST00000535789 AURKAIP1Q9NWT8 199 aaPredicted RBP12.78□□□□□ -0.36
ATL3-202ENST00000535789 NUDT19A8MXV4 375 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 H7C2Y5 167 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 ELANEP08246 267 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 VDAC1P21796 283 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 MC5RP33032 325 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 RFX2P48378 723 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 KRTAP10-11P60412 298 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 MEF2DQ14814 521 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 MRGPRG-AS1Q2M3A8 158 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 RNASE10Q5GAN6 216 aaKnown RBP12.77□□□□□ -0.37
ATL3-202ENST00000535789 LIN54Q6MZP7 749 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 PDPNQ86YL7 162 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 DDB2Q92466 427 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 GNB4Q9HAV0 340 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 KIAA1456Q9P272 454 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 ZNF221Q9UK13 617 aa12.77□□□□□ -0.37
ATL3-202ENST00000535789 TRAV41A0A0B4J266 112 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 IGKV1D-13A0A0B4J2D9 117 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 NAP1L6A6NFF2 107 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 LINC00473A8K010 186 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 IGLV2-14P01704 120 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 IGKV1-13P0DP09 117 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 FAUP35544 74 aaKnown RBP12.76□□□□□ -0.37
ATL3-202ENST00000535789 CDX1P47902 265 aaPredicted RBP12.76□□□□□ -0.37
ATL3-202ENST00000535789 DEFA1P59665 94 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 DEFA3P59666 94 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 CX3CL1P78423 397 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 ECSCRQ19T08 205 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 CXorf66Q5JRM2 361 aaPredicted RBP12.76□□□□□ -0.37
ATL3-202ENST00000535789 ASPHD1Q5U4P2 390 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 POC5Q8NA72 575 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 MINDY2Q8NBR6 621 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 CASTOR1Q8WTX7 329 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 FAM103A1Q9BTL3 118 aaKnown RBP12.76□□□□□ -0.37
ATL3-202ENST00000535789 GON7Q9BXV9 100 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 NECAP2Q9NVZ3 263 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 EHFQ9NZC4 300 aa12.76□□□□□ -0.37
ATL3-202ENST00000535789 METTL1Q9UBP6 276 aaKnown RBP12.76□□□□□ -0.37
ATL3-202ENST00000535789 ARPC1BO15143 372 aaKnown RBP12.75□□□□□ -0.37
ATL3-202ENST00000535789 CA2P00918 260 aa12.75□□□□□ -0.37
ATL3-202ENST00000535789 CRYGBP07316 175 aa12.75□□□□□ -0.37
ATL3-202ENST00000535789 FHL3Q13643 280 aa12.75□□□□□ -0.37
ATL3-202ENST00000535789 ZNF660Q6AZW8 331 aaPredicted RBP12.75□□□□□ -0.37
ATL3-202ENST00000535789 ARRDC1Q8N5I2 433 aa12.75□□□□□ -0.37
ATL3-202ENST00000535789 RCC1LQ96I51 464 aaKnown RBP12.75□□□□□ -0.37
ATL3-202ENST00000535789 CLCC1Q96S66 551 aa12.75□□□□□ -0.37
ATL3-202ENST00000535789 GINS4Q9BRT9 223 aa12.75□□□□□ -0.37
ATL3-202ENST00000535789 SLC35D1Q9NTN3 355 aa12.75□□□□□ -0.37
ATL3-202ENST00000535789 SLC2A8Q9NY64 477 aa12.75□□□□□ -0.37
ATL3-202ENST00000535789 SRRM4A7MD48 611 aaKnown RBP12.74□□□□□ -0.37
ATL3-202ENST00000535789 CENPXA8MT69 81 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 SLC25A17O43808 307 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 SPDEFO95238 335 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 CTXN2P0C2S0 81 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 OR5H8P0DN80 308 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 NFYAP23511 347 aaPredicted RBP12.74□□□□□ -0.37
ATL3-202ENST00000535789 SLC6A1P30531 599 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 HOXD3P31249 432 aaPredicted RBP12.74□□□□□ -0.37
ATL3-202ENST00000535789 DUTP33316 252 aaKnown RBP12.74□□□□□ -0.37
ATL3-202ENST00000535789 MYCNOSP40205 109 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 PJVKQ0ZLH3 352 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 ZNF491Q8N8L2 437 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 OR51S1Q8NGJ8 323 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 C4orf3Q8WVX3 66 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 RNF5Q99942 180 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 MCUBQ9NWR8 336 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 NUBP2Q9Y5Y2 271 aa12.74□□□□□ -0.37
ATL3-202ENST00000535789 DISC1C4P0D8 188 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 CCL24O00175 119 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 TUSC2O75896 110 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 PTTG1O95997 202 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 APOA2P02652 100 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 CCR6P51684 374 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 RPS16P62249 146 aaKnown RBP12.73□□□□□ -0.37
ATL3-202ENST00000535789 GNB1P62873 340 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 EGFEM1PQ0D2K5 195 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 EIF4EBP1Q13541 118 aaPredicted RBP12.73□□□□□ -0.37
ATL3-202ENST00000535789 RGS21Q2M5E4 152 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 TMEM177Q53S58 311 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 MZT2BQ6NZ67 158 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 DHRS11Q6UWP2 260 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 NRARPQ7Z6K4 114 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 LHFPL1Q86WI0 220 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 BVESQ8NE79 360 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 MRGPRFQ96AM1 343 aa12.73□□□□□ -0.37
ATL3-202ENST00000535789 A0A1W2PN81 502 aa12.72□□□□□ -0.37
ATL3-202ENST00000535789 I3L521 148 aa12.72□□□□□ -0.37
ATL3-202ENST00000535789 IFNA6P05013 189 aa12.72□□□□□ -0.37
ATL3-202ENST00000535789 SPNP16150 400 aa12.72□□□□□ -0.37
ATL3-202ENST00000535789 CHRNA7P36544 502 aa12.72□□□□□ -0.37
ATL3-202ENST00000535789 RPL30P62888 115 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms