RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SPATA3Q8NHX4 192 aa9.55□□□□□ -0.88
CHD4-203ENST00000535717 HARBI1Q96MB7 349 aa9.55□□□□□ -0.88
CHD4-203ENST00000535717 TSNAXQ99598 290 aaKnown RBP9.55□□□□□ -0.88
CHD4-203ENST00000535717 FBXL15Q9H469 300 aa9.55□□□□□ -0.88
CHD4-203ENST00000535717 HRASLSQ9HDD0 168 aa9.55□□□□□ -0.88
CHD4-203ENST00000535717 KIAA1456Q9P272 454 aa9.55□□□□□ -0.88
CHD4-203ENST00000535717 SLC25A17O43808 307 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 RAMP3O60896 148 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 SPDEFO95238 335 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 IGHG2P01859 326 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 RLN1P04808 185 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 PGAM2P15259 253 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 PI3P19957 117 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 KIR2DS2P43631 304 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 LGALS7P47929 136 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 KRTAP10-3P60369 221 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 CATR1Q13166 79 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 ZFP69Q49AA0 526 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 LIN54Q6MZP7 749 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 ZNF767PQ75MW2 155 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 SPAG16Q8N0X2 631 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 KLHDC1Q8N7A1 406 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 C3orf56Q8N813 242 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 OR13C8Q8NGS7 320 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 OR51H1Q8NH63 302 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 OR4S2Q8NH73 311 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 OSR1Q8TAX0 266 aaPredicted RBP9.54□□□□□ -0.88
CHD4-203ENST00000535717 MARCH1Q8TCQ1 289 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 WFDC12Q8WWY7 111 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 PRRT1Q99946 306 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 HSPB9Q9BQS6 159 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 WNT10AQ9GZT5 417 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 MCUBQ9NWR8 336 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 SLC2A8Q9NY64 477 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 METTL1Q9UBP6 276 aaKnown RBP9.54□□□□□ -0.88
CHD4-203ENST00000535717 DNHD1Q96M86 4753 aa9.54□□□□□ -0.88
CHD4-203ENST00000535717 HMX3A6NHT5 357 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 CENPXA8MT69 81 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 FCN1O00602 326 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 RBFOX2O43251 390 aaKnown RBP eCLIP9.53□□□□□ -0.88
CHD4-203ENST00000535717 HLA-DRB1P01911 266 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 CRYGBP07316 175 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 VSIG10L2P0DP72 767 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 CTAG1AP78358 180 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 SRSF4Q08170 494 aaKnown RBP9.53□□□□□ -0.88
CHD4-203ENST00000535717 PLGLAQ15195 96 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 TRIQKQ629K1 86 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 ZNF57Q68EA5 555 aaPredicted RBP9.53□□□□□ -0.88
CHD4-203ENST00000535717 SLC35E3Q7Z769 313 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 POC5Q8NA72 575 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 ZNF747Q9BV97 191 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 SLC2A9Q9NRM0 540 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 TPSG1Q9NRR2 321 aa9.53□□□□□ -0.88
CHD4-203ENST00000535717 PLXNB1O43157 2135 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 IGHV7-81A0A0B4J1V7 117 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 IL7P13232 177 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 CTRB1P17538 263 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 F2RP25116 425 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 S100GP29377 79 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 FAUP35544 74 aaKnown RBP9.52□□□□□ -0.89
CHD4-203ENST00000535717 UBE2KP61086 200 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 RND3P61587 244 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 PJVKQ0ZLH3 352 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 CTRB2Q6GPI1 263 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 TBC1D26Q86UD7 250 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 TCTE3Q8IZS6 198 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 VKORC1L1Q8N0U8 176 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 ZFAND1Q8TCF1 268 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 WIPF2Q8TF74 440 aaPredicted RBP9.52□□□□□ -0.89
CHD4-203ENST00000535717 DEDD2Q8WXF8 326 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 NOL4LQ96MY1 436 aaPredicted RBP9.52□□□□□ -0.89
CHD4-203ENST00000535717 CLCC1Q96S66 551 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 LINC00527Q9UJ94 153 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 SCP2D1Q9UJQ7 156 aa9.52□□□□□ -0.89
CHD4-203ENST00000535717 LINC00854A0A1B0GVQ3 168 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 MPPED1O15442 326 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 KCNAB3O43448 404 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 S1PR2O95136 353 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 CTSDP07339 412 aaPredicted RBP9.51□□□□□ -0.89
CHD4-203ENST00000535717 SAA1P0DJI8 122 aaPredicted RBP9.51□□□□□ -0.89
CHD4-203ENST00000535717 ECI1P42126 302 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 INPP1P49441 399 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 PIGPP57054 158 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 CX3CL1P78423 397 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 NDPQ00604 133 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 SURF2Q15527 256 aaPredicted RBP9.51□□□□□ -0.89
CHD4-203ENST00000535717 MRGPRG-AS1Q2M3A8 158 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 VMA21Q3ZAQ7 101 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 ZNF585BQ52M93 769 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 PPP1R27Q86WC6 154 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 FOXRED2Q8IWF2 684 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 CD300LFQ8TDQ1 290 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 ST6GAL2Q96JF0 529 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 RTBDNQ9BSG5 229 aaPredicted RBP9.51□□□□□ -0.89
CHD4-203ENST00000535717 OR51J1Q9H342 316 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 C5orf66Q9H5L9 145 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 GPR132Q9UNW8 380 aa9.51□□□□□ -0.89
CHD4-203ENST00000535717 VWFP04275 2813 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 AP4M1O00189 453 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 HPRT1P00492 218 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms