RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 TMEM222Q9H0R3 208 aa12.42□□□□□ -0.42
CNN1-202ENST00000535659 KIAA1456Q9P272 454 aa12.42□□□□□ -0.42
CNN1-202ENST00000535659 M0QZK8 103 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 RRHO14718 337 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 S1PR2O95136 353 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 SFT2D2O95562 160 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 CDS2O95674 445 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 IGLV2-23P01705 113 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 RPA2P15927 270 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 NQO2P16083 231 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 VAMP1P23763 118 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 PPP1R1AQ13522 171 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 RGS21Q2M5E4 152 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 BEX1Q9HBH7 125 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 COMMD9Q9P000 198 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 MOB4Q9Y3A3 225 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 FBN3Q75N90 2809 aa12.41□□□□□ -0.42
CNN1-202ENST00000535659 FAM181BA6NEQ2 426 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 INMT-MINDY4F8WBC2 141 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 FGF16O43320 207 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 NDUFA3O95167 84 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 SPDEFO95238 335 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 AMY1AP04745 511 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 SPNP16150 400 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 RAB25P57735 213 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 TMEM187Q14656 261 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 TRIM16LQ309B1 348 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 VMA21Q3ZAQ7 101 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 C4orf46Q504U0 113 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 VKORC1L1Q8N0U8 176 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 Q8N9W7 124 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 R3HDM4Q96D70 268 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 RHOVQ96L33 236 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 MARVELD1Q9BSK0 173 aa12.4□□□□□ -0.42
CNN1-202ENST00000535659 METTL1Q9UBP6 276 aaKnown RBP12.4□□□□□ -0.42
CNN1-202ENST00000535659 C9orf170A2RU37 121 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 SLC25A17O43808 307 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 KRASP01116 189 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 IGKV1-39P01597 117 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 IGKV1D-39P04432 117 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 CRYGBP07316 175 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 RAG2P55895 527 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 UBE2KP61086 200 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 RPL15P61313 204 aaKnown RBP12.39□□□□□ -0.43
CNN1-202ENST00000535659 BLCAPP62952 87 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 POU2AF1Q16633 256 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 C5orf64Q2M2E5 130 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 LIN54Q6MZP7 749 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 FAM71E2Q8N5Q1 922 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 C5orf56Q8N8D9 126 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 TEX45Q8NA69 505 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 ZFAND2BQ8WV99 257 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 TMEM56Q96MV1 263 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 RASL11BQ9BPW5 248 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 FBXL15Q9H469 300 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 TMEM56-RWDD3S4R434 201 aa12.39□□□□□ -0.43
CNN1-202ENST00000535659 ATG12O94817 140 aa12.38□□□□□ -0.43
CNN1-202ENST00000535659 HLA-AP01891 365 aaKnown RBP12.38□□□□□ -0.43
CNN1-202ENST00000535659 CRYBA1P05813 215 aa12.38□□□□□ -0.43
CNN1-202ENST00000535659 SRSF2Q01130 221 aaKnown RBP12.38□□□□□ -0.43
CNN1-202ENST00000535659 DHRS2Q13268 280 aa12.38□□□□□ -0.43
CNN1-202ENST00000535659 SSX9Q7RTT3 188 aa12.38□□□□□ -0.43
CNN1-202ENST00000535659 LYG2Q86SG7 212 aa12.38□□□□□ -0.43
CNN1-202ENST00000535659 ZNF695Q8IW36 515 aa12.38□□□□□ -0.43
CNN1-202ENST00000535659 SELENOHQ8IZQ5 122 aaKnown RBP12.38□□□□□ -0.43
CNN1-202ENST00000535659 DMBX1Q8NFW5 382 aa12.38□□□□□ -0.43
CNN1-202ENST00000535659 VSTM2AQ8TAG5 236 aa12.38□□□□□ -0.43
CNN1-202ENST00000535659 CASTOR1Q8WTX7 329 aa12.38□□□□□ -0.43
CNN1-202ENST00000535659 NPFFR1Q9GZQ6 430 aa12.38□□□□□ -0.43
CNN1-202ENST00000535659 SIGLEC9Q9Y336 463 aa12.38□□□□□ -0.43
CNN1-202ENST00000535659 JMJD1CQ15652 2540 aa12.38□□□□□ -0.43
CNN1-202ENST00000535659 OR2A4O95047 310 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 DHFRP00374 187 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 IL5P05113 134 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 SAA1P0DJI8 122 aaPredicted RBP12.37□□□□□ -0.43
CNN1-202ENST00000535659 G6PCP35575 357 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 ERVK-16P61578 105 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 SRPXP78539 464 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 PLGLAQ15195 96 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 PPP1R27Q86WC6 154 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 PUSL1Q8N0Z8 303 aaKnown RBP12.37□□□□□ -0.43
CNN1-202ENST00000535659 CADM3Q8N126 398 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 LGI3Q8N145 548 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 LHFPL5Q8TAF8 219 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 RBPMSQ93062 196 aaKnown RBP12.37□□□□□ -0.43
CNN1-202ENST00000535659 IL22RA2Q969J5 263 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 SEC22AQ96IW7 307 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 OR2A7Q96R45 310 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 PRR13Q9NZ81 148 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 MARCH11A6NNE9 402 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 FCN1O00602 326 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 DUS4LO95620 317 aaKnown RBP12.37□□□□□ -0.43
CNN1-202ENST00000535659 IL6RP08887 468 aaPredicted RBP12.37□□□□□ -0.43
CNN1-202ENST00000535659 ANKRD55Q3KP44 614 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 TMEM268Q5VZI3 342 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 OR4A47Q6IF82 309 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 PRIMA1Q86XR5 153 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 CLCC1Q96S66 551 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 PRSS22Q9GZN4 317 aa12.37□□□□□ -0.43
CNN1-202ENST00000535659 BET1LQ9NYM9 111 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms