RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 JTBO76095 146 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 HRASP01112 189 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 IGLV2-23P01705 113 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 KIR2DS2P43631 304 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 CD81P60033 236 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 GUCA2BQ16661 112 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 CDNFQ49AH0 187 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 ZFAND6Q6FIF0 208 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 IZUMO2Q6UXV1 221 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 IDO2Q6ZQW0 420 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 Q6ZS49 121 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 H1FOOQ8IZA3 346 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 FCGR1BQ92637 280 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 FYTTD1Q96QD9 318 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 OR51E2Q9H255 320 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 SSR3Q9UNL2 185 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 ZNF257Q9Y2Q1 563 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 OR2W1Q9Y3N9 320 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 NOTOA8MTQ0 251 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 ANKRD65E5RJM6 399 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 RAB27BO00194 218 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 GGCTO75223 188 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 CRYGBP07316 175 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 SAA1P0DJI8 122 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 PSMB9P28065 219 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 MAS1LP35410 378 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 OR10A3P58181 314 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 CATR1Q13166 79 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 ANKRD55Q3KP44 614 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 FAM106AQ4KMX7 169 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 OR2B11Q5JQS5 317 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 HACD4Q5VWC8 232 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 C22orf42Q6IC83 251 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 CNIH2Q6PI25 160 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 ADAD2Q8NCV1 583 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 BORCS5Q969J3 196 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 OR2A7Q96R45 310 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 ZNF430Q9H8G1 570 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 THYN1Q9P016 225 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 DNAH9Q9NYC9 4486 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 COL7A1Q02388 2944 aa10.12□□□□□ -0.79
CLSTN3-205ENST00000535452 HIST1H1BP16401 226 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 NFYAP23511 347 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 RPL27AP46776 148 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 GABARAPL2P60520 117 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 DYRK1AQ13627 763 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 C15orf32Q32M92 178 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 OR4A47Q6IF82 309 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 TPRA1Q86W33 373 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 EEF1AKMT3Q96AZ1 226 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 HRASLSQ9HDD0 168 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 AKIP1Q9NQ31 210 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 C19orf73Q9NVV2 129 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 TECRQ9NZ01 308 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 NKX1-2Q9UD57 310 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 RAB26Q9ULW5 256 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 SPATA2Q9UM82 520 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 KCNK7Q9Y2U2 307 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 RBMX2Q9Y388 322 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 CEPT1Q9Y6K0 416 aa10.11□□□□□ -0.79
CLSTN3-205ENST00000535452 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-205ENST00000535452 ZNF320A2RRD8 509 aa10.1□□□□□ -0.79
CLSTN3-205ENST00000535452 OR2J3O76001 311 aa10.1□□□□□ -0.79
CLSTN3-205ENST00000535452 CSN3P07498 182 aa10.1□□□□□ -0.79
CLSTN3-205ENST00000535452 DEFA5Q01523 94 aa10.1□□□□□ -0.79
CLSTN3-205ENST00000535452 HAGHQ16775 308 aa10.1□□□□□ -0.79
CLSTN3-205ENST00000535452 ZNF66Q6ZN08 573 aa10.1□□□□□ -0.79
CLSTN3-205ENST00000535452 Q8N1Y9 231 aa10.1□□□□□ -0.79
CLSTN3-205ENST00000535452 TTC9CQ8N5M4 171 aa10.1□□□□□ -0.79
CLSTN3-205ENST00000535452 NEURL2Q9BR09 285 aa10.1□□□□□ -0.79
CLSTN3-205ENST00000535452 DAPK2Q9UIK4 370 aa10.1□□□□□ -0.79
CLSTN3-205ENST00000535452 FBXL7Q9UJT9 491 aa10.1□□□□□ -0.79
CLSTN3-205ENST00000535452 SRRM4A7MD48 611 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 LINC00473A8K010 186 aa10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 KBTBD11O94819 623 aa10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 ARL3P36405 182 aa10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 ZBTB34Q8NCN2 500 aa10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 OR4A5Q8NH83 315 aa10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 DDB2Q92466 427 aa10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 CXorf58Q96LI9 332 aa10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 PLEKHA3Q9HB20 300 aa10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 DIABLOQ9NR28 239 aa10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 TAS2R8Q9NYW2 309 aa10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 ANXA10Q9UJ72 324 aa10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 RRP15Q9Y3B9 282 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-205ENST00000535452 LCE6AA0A183 80 aa10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 TMEM235A6NFC5 223 aa10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 NPIPB5A8MRT5 1133 aa10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 OR11H12B2RN74 326 aa10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 TRBV12-3P01733 135 aa10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 HLA-DQB1P01920 261 aa10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 PRH1P02810 166 aa10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 ERVK-16P61578 105 aa10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 RPL8P62917 257 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 CD300EQ496F6 205 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 RBPMS2Q6ZRY4 209 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 TSPAN14Q8NG11 270 aa10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 SECTM1Q8WVN6 248 aa10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 NRG4Q8WWG1 115 aa10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 COMMD5Q9GZQ3 224 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms