RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 SFRP2Q96HF1 295 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 POM121L2Q96KW2 1035 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 FAM173AQ9BQD7 235 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 LRFN3Q9BTN0 628 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 STRADBQ9C0K7 418 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 MARCH11A6NNE9 402 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 NUPR1O60356 82 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 CER1O95813 267 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 GNB1P62873 340 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 Q0VFX4 171 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 ZNF114Q8NC26 417 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 SRP14P37108 136 aaKnown RBP13.37□□□□□ -0.27
MCF2L-232ENST00000535094 TGIF2LYQ8IUE0 185 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 RNF138Q8WVD3 245 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 MRPL18Q9H0U6 180 aaKnown RBP13.37□□□□□ -0.27
MCF2L-232ENST00000535094 ZNF586Q9NXT0 402 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 TCF21O43680 179 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 PSPNO60542 156 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 RPLP1P05386 114 aaKnown RBP13.36□□□□□ -0.27
MCF2L-232ENST00000535094 LBHQ53QV2 105 aaPredicted RBP13.36□□□□□ -0.27
MCF2L-232ENST00000535094 ABLIM2Q6H8Q1 611 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 SAXO1Q8IYX7 474 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 PXMP4Q9Y6I8 212 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 ACACAQ13085 2346 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 INTS1Q8N201 2190 aaKnown RBP13.36□□□□□ -0.27
MCF2L-232ENST00000535094 LOC102723996A0A087X1L8 192 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 H0Y8G0 127 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 SERF1AO75920 110 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 LINC01551Q86U37 167 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 DKK1O94907 266 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 TMEM183BQ1AE95 376 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 NHLRC2Q8NBF2 726 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 SPSB4Q96A44 273 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 HSD17B10Q99714 261 aaKnown RBP13.36□□□□□ -0.27
MCF2L-232ENST00000535094 PPIAL4AQ9Y536 164 aa13.36□□□□□ -0.27
MCF2L-232ENST00000535094 ZNF253O75346 499 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 GBGT1Q8N5D6 347 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 TMEM251Q8N6I4 163 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 PDE6DO43924 150 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 OR10J4P0C629 311 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 RPL31P62899 125 aaKnown RBP13.35□□□□□ -0.27
MCF2L-232ENST00000535094 SUMO1P63165 101 aaKnown RBP13.35□□□□□ -0.27
MCF2L-232ENST00000535094 RPP30P78346 268 aaKnown RBP13.35□□□□□ -0.27
MCF2L-232ENST00000535094 DMRTA1Q5VZB9 504 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 ZNF645Q8N7E2 425 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 AKAP6Q13023 2319 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 MT-CO2P00403 227 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 COL8A2P25067 703 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 DAZAP2Q15038 168 aaPredicted RBP13.35□□□□□ -0.27
MCF2L-232ENST00000535094 TDRG1Q3Y452 100 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 DOLPP1Q86YN1 238 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 TAAR6Q96RI8 345 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 TTTY12Q9BZ98 90 aa13.35□□□□□ -0.27
MCF2L-232ENST00000535094 TNFSF10P50591 281 aa13.34□□□□□ -0.27
MCF2L-232ENST00000535094 PSG5Q15238 335 aa13.34□□□□□ -0.27
MCF2L-232ENST00000535094 OCC1Q8TAD7 63 aa13.34□□□□□ -0.27
MCF2L-232ENST00000535094 FAM216AQ8WUB2 273 aa13.34□□□□□ -0.27
MCF2L-232ENST00000535094 POLR3KQ9Y2Y1 108 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-232ENST00000535094 IGHV3OR15-7A0A075B7D8 119 aa13.34□□□□□ -0.27
MCF2L-232ENST00000535094 NEURL1O76050 574 aa13.34□□□□□ -0.27
MCF2L-232ENST00000535094 CD82P27701 267 aa13.34□□□□□ -0.27
MCF2L-232ENST00000535094 TMEM14EPQ6UXP3 125 aa13.34□□□□□ -0.27
MCF2L-232ENST00000535094 S1PR3Q99500 378 aa13.34□□□□□ -0.27
MCF2L-232ENST00000535094 CLCF1Q9UBD9 225 aa13.34□□□□□ -0.27
MCF2L-232ENST00000535094 SPTAN1Q13813 2472 aaKnown RBP13.34□□□□□ -0.27
MCF2L-232ENST00000535094 CACNA1BQ00975 2339 aa13.34□□□□□ -0.27
MCF2L-232ENST00000535094 IGHEP01854 428 aa13.33□□□□□ -0.27
MCF2L-232ENST00000535094 IRF2P14316 349 aa13.33□□□□□ -0.27
MCF2L-232ENST00000535094 TIGITQ495A1 244 aa13.33□□□□□ -0.27
MCF2L-232ENST00000535094 ACTL10Q5JWF8 245 aa13.33□□□□□ -0.27
MCF2L-232ENST00000535094 ASPHD1Q5U4P2 390 aa13.33□□□□□ -0.27
MCF2L-232ENST00000535094 WNT10AQ9GZT5 417 aa13.33□□□□□ -0.27
MCF2L-232ENST00000535094 MEOX1P50221 254 aa13.33□□□□□ -0.28
MCF2L-232ENST00000535094 Q6ZN92 141 aa13.33□□□□□ -0.28
MCF2L-232ENST00000535094 Q8IYB0 196 aa13.33□□□□□ -0.28
MCF2L-232ENST00000535094 ZCCHC14Q8WYQ9 949 aaKnown RBP13.33□□□□□ -0.28
MCF2L-232ENST00000535094 BORCS7Q96B45 105 aa13.33□□□□□ -0.28
MCF2L-232ENST00000535094 FAM122AQ96E09 287 aa13.33□□□□□ -0.28
MCF2L-232ENST00000535094 DIRC3C9JPN6 131 aa13.33□□□□□ -0.28
MCF2L-232ENST00000535094 MKRN2OSH3BPM6 223 aa13.33□□□□□ -0.28
MCF2L-232ENST00000535094 NPPCP23582 126 aa13.33□□□□□ -0.28
MCF2L-232ENST00000535094 GNG4P50150 75 aa13.33□□□□□ -0.28
MCF2L-232ENST00000535094 GNG10P50151 68 aa13.33□□□□□ -0.28
MCF2L-232ENST00000535094 WDFY4Q6ZS81 3184 aa13.33□□□□□ -0.28
MCF2L-232ENST00000535094 LY6G6EA0A0G2JKS1 128 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 RBFOX2O43251 390 aaKnown RBP eCLIP13.32□□□□□ -0.284e-6■■□□□ 13.5
MCF2L-232ENST00000535094 GATA2P23769 480 aaPredicted RBP13.32□□□□□ -0.28
MCF2L-232ENST00000535094 RNF151Q2KHN1 245 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 RPL39P5Q59GN2 51 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 ZNF497Q6ZNH5 498 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 FAM19A2Q8N3H0 131 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 OR2Z1Q8NG97 314 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 U3KQA8 63 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 RRHO14718 337 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 TIPARPQ7Z3E1 657 aaKnown RBP13.32□□□□□ -0.28
MCF2L-232ENST00000535094 STARD4Q96DR4 205 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 HSPB7Q9UBY9 170 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 OOEPA6NGQ2 149 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 HLA-DRB5Q30154 266 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 C11orf42Q8N5U0 333 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms