RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 CEACAM6P40199 344 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 CEBPDP49716 269 aaPredicted RBP4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 UBE2KP61086 200 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 UBE2NP61088 152 aaKnown RBP4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 ARG2P78540 354 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 HTD2P86397 168 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 SLC38A11Q08AI6 406 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 ELOBQ15370 118 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 ATP6V1FQ16864 119 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TMEM249Q2WGJ8 235 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TMEM41BQ5BJD5 291 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 WDR25Q64LD2 544 aaPredicted RBP4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 FAM53AQ6NSI3 398 aaPredicted RBP4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 ACSM6Q6P461 480 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 ZNF826PQ6ZT77 177 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 VASH2Q86V25 355 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 ZNF429Q86V71 674 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 C1orf174Q8IYL3 243 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 FAM24BQ8N5W8 94 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 OR52L2PQ8NGH6 319 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 Q8WTZ3 238 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TAF15Q92804 592 aaKnown RBP eCLIP4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 PINX1Q96BK5 328 aaKnown RBP4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TVP23CQ96ET8 276 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 PYGO2Q9BRQ0 406 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 RSG1Q9BU20 258 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 C20orf24Q9BUV8 137 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 SDF2L1Q9HCN8 221 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 KCNIP1Q9NZI2 227 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TINAGQ9UJW2 476 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TRAPPC2LQ9UL33 140 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 R4GN57 208 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 CACNA1DQ01668 2161 aa4.87□□□□□ -1.63
TNFRSF1A-206ENST00000535038 VPS13AQ96RL7 3174 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 HCFC1P51610 2035 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TET2Q6N021 2002 aaPredicted RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TRAV17A0A0B4J275 112 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 IGHV2OR16-5A0A0B4J2B6 119 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 A0A1B0GV50 99 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 MBD3L4A6NDZ8 208 aaPredicted RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 MBD3L3A6NE82 208 aaPredicted RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 MBD3L5A6NJ08 208 aaPredicted RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 IFITM10A6NMD0 228 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 ZNF727A8MUV8 499 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 PRSS46E5RG02 174 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 ITGB1BP1O14713 200 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 NKX2-8O15522 239 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 RBFOX2O43251 390 aaKnown RBP eCLIP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 RAMP3O60896 148 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 WDR1O75083 606 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 CD81P60033 236 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 GNB2P62879 340 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 HBG1P69891 147 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 HBG2P69892 147 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 NKX6-1P78426 367 aaPredicted RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 DLK1P80370 383 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 PNRC1Q12796 327 aaPredicted RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 SRSF6Q13247 344 aaKnown RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TRIP6Q15654 476 aaKnown RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 PRAMEF6Q5VXH4 476 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TRAT1Q6PIZ9 186 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 FIP1L1Q6UN15 594 aaKnown RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 RBMS3Q6XE24 437 aaKnown RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 P4HA3Q7Z4N8 544 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 RPP25LQ8N5L8 163 aaKnown RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 CD177Q8N6Q3 437 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 FDCSPQ8NFU4 85 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 OR13A1Q8NGR1 328 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 OR13D1Q8NGV5 346 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 MBD3L2Q8NHZ7 208 aaPredicted RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 UBALD1Q8TB05 177 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 CD300LFQ8TDQ1 290 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 FAM222BQ8WU58 562 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 IL1F10Q8WWZ1 152 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 GALMQ96C23 342 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 STARD4Q96DR4 205 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TAAR6Q96RI8 345 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TMEM147Q9BVK8 224 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 BCL2L14Q9BZR8 327 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 ZNF665Q9H7R5 613 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 ZNF71Q9NQZ8 489 aaPredicted RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 VAX2Q9UIW0 290 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 GAB2Q9UQC2 676 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 PUS1Q9Y606 427 aaKnown RBP eCLIP4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 SLC25A15Q9Y619 301 aa4.86□□□□□ -1.63
TNFRSF1A-206ENST00000535038 DIDO1Q9BTC0 2240 aaKnown RBP4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 FRYLO94915 3013 aa4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TRBV24-1A0A075B6N3 115 aa4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 IGKV1D-17A0A075B6S4 117 aa4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 CTXND1A0A1B0GTU2 59 aa4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 C15orf62A8K5M9 175 aa4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 SRRM5B3KS81 715 aa4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 SEC14L6B5MCN3 397 aa4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 CLN5O75503 358 aa4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 S1PR2O95136 353 aa4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 CYB5R3P00387 301 aaPredicted RBP4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 LHBP01229 141 aa4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 IFNA17P01571 189 aa4.85□□□□□ -1.63
TNFRSF1A-206ENST00000535038 TFF1P04155 84 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms