RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 MDFIC2A0A1B0GVS7 189 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 PRSS46E5RG02 174 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 EREGO14944 169 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 ADH4P08319 380 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 EDDM3BP56851 147 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 TMPRSS3P57727 454 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 NUTF2P61970 127 aaKnown RBP13.82□□□□□ -0.2
CTSB-228ENST00000533455 TGFBR3Q03167 851 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 FOXF2Q12947 444 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 PDLIM3Q53GG5 364 aaPredicted RBP13.82□□□□□ -0.2
CTSB-228ENST00000533455 INO80CQ6PI98 192 aaPredicted RBP13.82□□□□□ -0.2
CTSB-228ENST00000533455 KIR2DL5AQ8N109 375 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 OR52E5Q8NH55 327 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 FAM216AQ8WUB2 273 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 HCFC1P51610 2035 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 IGHV3-43A0A0B4J1X8 118 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 C15orf65H3BRN8 121 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 RBFOX2O43251 390 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■■□□ 18.4
CTSB-228ENST00000533455 IGHV3-43DP0DP04 118 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 DUTP33316 252 aaKnown RBP13.81□□□□□ -0.2
CTSB-228ENST00000533455 SOX8P57073 446 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 LINC00205P59089 165 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 C1orf194Q5T5A4 169 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 TEX38Q6PEX7 206 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 TREML4Q6UXN2 200 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 WDR82Q6UXN9 313 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 TGIF2LXQ8IUE1 241 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 NEU1Q99519 415 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 DEFB127Q9H1M4 99 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 TRAV9-1A0A075B6T8 112 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 TRGV5A0A0B4J1U4 118 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 CXorf1O96002 111 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 HPRT1P00492 218 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 ARL14EPLP0DKL9 152 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 VDAC2P45880 294 aaPredicted RBP13.81□□□□□ -0.2
CTSB-228ENST00000533455 CXorf67Q86X51 503 aaPredicted RBP13.81□□□□□ -0.2
CTSB-228ENST00000533455 SGMS2Q8NHU3 365 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 MGST2Q99735 147 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 AURKAIP1Q9NWT8 199 aaPredicted RBP13.81□□□□□ -0.2
CTSB-228ENST00000533455 MED13Q9UHV7 2174 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 METRNQ9UJH8 293 aa13.81□□□□□ -0.2
CTSB-228ENST00000533455 TRBV20OR9-2A0A075B6H5 130 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 A0A1W2PNU3 283 aaPredicted RBP13.8□□□□□ -0.2
CTSB-228ENST00000533455 ZNF883P0CG24 379 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 ERVFC1-1P60608 527 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 TMEM256Q8N2U0 113 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 GGTLC1Q9BX51 225 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 NAGKQ9UJ70 344 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 POLR3KQ9Y2Y1 108 aaPredicted RBP13.8□□□□□ -0.2
CTSB-228ENST00000533455 PGPEP1LA6NFU8 196 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 SPINT2O43291 252 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 TFF1P04155 84 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 CD46P15529 392 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 BMP5P22003 454 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 GCH1P30793 250 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 SELENOTP62341 195 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 SMIM21Q3B7S5 101 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 ZNF718Q3SXZ3 478 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 PRAMEF5Q5TYX0 476 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 PRAMEF6Q5VXH4 476 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 WFIKKN1Q96NZ8 548 aa13.8□□□□□ -0.2
CTSB-228ENST00000533455 PATZ1Q9HBE1 687 aaKnown RBP13.8□□□□□ -0.2
CTSB-228ENST00000533455 PROP1O75360 226 aa13.79□□□□□ -0.2
CTSB-228ENST00000533455 SCGB1D1O95968 90 aa13.79□□□□□ -0.2
CTSB-228ENST00000533455 KITLGP21583 273 aa13.79□□□□□ -0.2
CTSB-228ENST00000533455 OR10J1P30954 320 aa13.79□□□□□ -0.2
CTSB-228ENST00000533455 ADMP35318 185 aa13.79□□□□□ -0.2
CTSB-228ENST00000533455 TIMP3P35625 211 aa13.79□□□□□ -0.2
CTSB-228ENST00000533455 GPR12P47775 334 aa13.79□□□□□ -0.2
CTSB-228ENST00000533455 HOXA4Q00056 320 aaPredicted RBP13.79□□□□□ -0.2
CTSB-228ENST00000533455 TPRX1Q8N7U7 411 aa13.79□□□□□ -0.2
CTSB-228ENST00000533455 OR4A16Q8NH70 328 aa13.79□□□□□ -0.2
CTSB-228ENST00000533455 Q8TCH9 128 aa13.79□□□□□ -0.2
CTSB-228ENST00000533455 MS4A5Q9H3V2 200 aa13.79□□□□□ -0.2
CTSB-228ENST00000533455 TET2Q6N021 2002 aaPredicted RBP13.78□□□□□ -0.2
CTSB-228ENST00000533455 SCO2A0A1W2PP80 73 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 DEFB108AA8MXU0 73 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 TCAPO15273 167 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 FCGR3BO75015 233 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 LYZL6O75951 148 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 OR10G8Q8NGN5 311 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 RFESDQ8TAC1 157 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 MS4A10Q96PG2 267 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 CACNA1DQ01668 2161 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 RRHO14718 337 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 NUPR1O60356 82 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 GFRA3O60609 400 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 ZNF124Q15973 351 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 RNFT1Q5M7Z0 435 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 MIC13Q5XKP0 118 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 TMEM204Q9BSN7 226 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 SNHG12Q9BXW3 62 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 ZDHHC11Q9H8X9 412 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 TUBG2Q9NRH3 451 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 JPT1Q9UK76 154 aa13.78□□□□□ -0.2
CTSB-228ENST00000533455 LSM4Q9Y4Z0 139 aaKnown RBP13.78□□□□□ -0.2
CTSB-228ENST00000533455 A0A1B0GUS0 222 aa13.77□□□□□ -0.21
CTSB-228ENST00000533455 C19orf67A6NJJ6 358 aa13.77□□□□□ -0.21
CTSB-228ENST00000533455 IGKV3-15P01624 115 aa13.77□□□□□ -0.21
CTSB-228ENST00000533455 ESDP10768 282 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms