RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 GVINP1Q7Z2Y8 2422 aa12.66□□□□□ -0.38
CACNA1E-208ENST00000533229 ADGRG4Q8IZF6 3080 aa12.66□□□□□ -0.38
CACNA1E-208ENST00000533229 TNFAIP6P98066 277 aaPredicted RBP12.66□□□□□ -0.38
CACNA1E-208ENST00000533229 FFAR4Q5NUL3 377 aa12.66□□□□□ -0.38
CACNA1E-208ENST00000533229 GATAD1Q8WUU5 269 aa12.66□□□□□ -0.38
CACNA1E-208ENST00000533229 DDB2Q92466 427 aa12.66□□□□□ -0.38
CACNA1E-208ENST00000533229 RNF7Q9UBF6 113 aa12.66□□□□□ -0.38
CACNA1E-208ENST00000533229 DOCK11Q5JSL3 2073 aa12.66□□□□□ -0.38
CACNA1E-208ENST00000533229 RELBQ01201 579 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 KRTCAP3Q53RY4 240 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 PRAMEF5Q5TYX0 476 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 STUMQ69YW2 141 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 P2RX4Q99571 388 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 COL25A1Q9BXS0 654 aaPredicted RBP12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 IL19Q9UHD0 177 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 ICE1Q9Y2F5 2266 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 TGIF2-C20orf24A0A0A6YYL0 155 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 KBTBD11-OT1A0A1B0GTJ5 212 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 RPS10P46783 165 aaKnown RBP12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 PMS2P11Q13670 270 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 WDR25Q64LD2 544 aaPredicted RBP12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 DOLPP1Q86YN1 238 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 SNRNP40Q96DI7 357 aaKnown RBP12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 SDSLQ96GA7 329 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 ABHD17AQ96GS6 310 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 S1PR3Q99500 378 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 CCL13Q99616 98 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 SDF2L1Q9HCN8 221 aa12.65□□□□□ -0.38
CACNA1E-208ENST00000533229 SAA2-SAA4A0A096LPE2 208 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 A0A0G2JNJ9 132 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 RRHO14718 337 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 RBFOX2O43251 390 aaKnown RBP eCLIP12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 S100A9P06702 114 aaKnown RBP12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 SAA2P0DJI9 122 aaPredicted RBP12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 NCMAPQ5T1S8 102 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 C1QL4Q86Z23 238 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 FAM216BQ8N7L0 139 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 OR4A16Q8NH70 328 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 GAFA1Q96PS6 74 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 GFOD1Q9NXC2 390 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 Q9UFV3 132 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 CTXND1A0A1B0GTU2 59 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 MMP23AO75900 390 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 GYPAP02724 150 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 VDAC2P45880 294 aaPredicted RBP12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 SPCS3P61009 180 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 MEF2BQ02080 365 aaPredicted RBP12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 GCSAMLQ5JQS6 135 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 TMEM170AQ8WVE7 144 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 RAB24Q969Q5 203 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 SIRT7Q9NRC8 400 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 TMEM140Q9NV12 185 aa12.64□□□□□ -0.39
CACNA1E-208ENST00000533229 CXorf65A6NEN9 183 aa12.63□□□□□ -0.39
CACNA1E-208ENST00000533229 FAM90A9PA6NNJ1 464 aa12.63□□□□□ -0.39
CACNA1E-208ENST00000533229 AP4M1O00189 453 aa12.63□□□□□ -0.39
CACNA1E-208ENST00000533229 CD1BP29016 333 aa12.63□□□□□ -0.39
CACNA1E-208ENST00000533229 ZCCHC24Q8N2G6 241 aaKnown RBP12.63□□□□□ -0.39
CACNA1E-208ENST00000533229 ABHD12Q8N2K0 398 aa12.63□□□□□ -0.39
CACNA1E-208ENST00000533229 FAM216AQ8WUB2 273 aa12.63□□□□□ -0.39
CACNA1E-208ENST00000533229 PLCE1Q9P212 2302 aa12.63□□□□□ -0.39
CACNA1E-208ENST00000533229 DSCAMO60469 2012 aa12.63□□□□□ -0.39
CACNA1E-208ENST00000533229 GFRA3O60609 400 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 IFNA1P01562 189 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 IFNA10P01566 189 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 MBP02144 154 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 TDGF1P3P51864 188 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 SELENOVP59797 346 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 CCL8P80075 99 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 SSX3Q99909 188 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 NCOR1P1Q9H4R4 102 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 WDR83OSQ9Y284 106 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 B4DEV8 164 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 PRSS46E5RG02 174 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 PNRC1Q12796 327 aaPredicted RBP12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 PDLIM3Q53GG5 364 aaPredicted RBP12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 ZNF788Q6ZQV5 615 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 CISD2Q8N5K1 135 aaKnown RBP12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 ZNF709Q8N972 641 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 ZNF383Q8NA42 475 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 ZNF439Q8NDP4 499 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 OR52E5Q8NH55 327 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 HEYLQ9NQ87 328 aaPredicted RBP12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 ZNRD1Q9P1U0 126 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 MIOXQ9UGB7 285 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 GAB2Q9UQC2 676 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 SPTBN2O15020 2390 aa12.62□□□□□ -0.39
CACNA1E-208ENST00000533229 TRGV10A0A0A0MS01 117 aa12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 ITGB1BP1O14713 200 aa12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 NBL1P41271 181 aa12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 ERVK-16P61578 105 aa12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 ACTR3CQ9C0K3 210 aaPredicted RBP12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 SH3BGRL2Q9UJC5 107 aa12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 TP53TG5Q9Y2B4 290 aa12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 MUC6Q6W4X9 2439 aa12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 PIEZO2Q9H5I5 2752 aa12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 TRAV20A0A0B4J274 112 aa12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 DPRXA6NFQ7 191 aa12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 IFITM10A6NMD0 228 aa12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 MKRN2OSH3BPM6 223 aa12.61□□□□□ -0.39
CACNA1E-208ENST00000533229 YIF1AO95070 293 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms