RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 J3QRK9 145 aa18.01■□□□□ 0.47
SMPD1-209ENST00000533196 ACTL6BO94805 426 aa18.01■□□□□ 0.47
SMPD1-209ENST00000533196 OR9G9P0C7N8 305 aa18.01■□□□□ 0.47
SMPD1-209ENST00000533196 SAA1P0DJI8 122 aaPredicted RBP18.01■□□□□ 0.47
SMPD1-209ENST00000533196 IGKV1-13P0DP09 117 aa18.01■□□□□ 0.47
SMPD1-209ENST00000533196 BEST4Q8NFU0 473 aa18.01■□□□□ 0.47
SMPD1-209ENST00000533196 SPIN2AQ99865 258 aa18.01■□□□□ 0.47
SMPD1-209ENST00000533196 SPIN2BQ9BPZ2 258 aa18.01■□□□□ 0.47
SMPD1-209ENST00000533196 DCUN1D5Q9BTE7 237 aa18.01■□□□□ 0.47
SMPD1-209ENST00000533196 SPATA2Q9UM82 520 aa18.01■□□□□ 0.47
SMPD1-209ENST00000533196 GP9P14770 177 aa18■□□□□ 0.47
SMPD1-209ENST00000533196 SPNP16150 400 aa18■□□□□ 0.47
SMPD1-209ENST00000533196 ARPC4P59998 168 aa18■□□□□ 0.47
SMPD1-209ENST00000533196 ZNF343Q6P1L6 599 aa18■□□□□ 0.47
SMPD1-209ENST00000533196 ZNF66Q6ZN08 573 aa18■□□□□ 0.47
SMPD1-209ENST00000533196 IDO2Q6ZQW0 420 aa18■□□□□ 0.47
SMPD1-209ENST00000533196 HOGA1Q86XE5 327 aa18■□□□□ 0.47
SMPD1-209ENST00000533196 ADAD2Q8NCV1 583 aaKnown RBP18■□□□□ 0.47
SMPD1-209ENST00000533196 OR4S2Q8NH73 311 aa18■□□□□ 0.47
SMPD1-209ENST00000533196 VSTM2AQ8TAG5 236 aa18■□□□□ 0.47
SMPD1-209ENST00000533196 ACOT12Q8WYK0 555 aa18■□□□□ 0.47
SMPD1-209ENST00000533196 ZNF430Q9H8G1 570 aaPredicted RBP18■□□□□ 0.47
SMPD1-209ENST00000533196 U3KQK5 164 aa18■□□□□ 0.47
SMPD1-209ENST00000533196 MPPED1O15442 326 aa17.99■□□□□ 0.47
SMPD1-209ENST00000533196 CBX5P45973 191 aa17.99■□□□□ 0.47
SMPD1-209ENST00000533196 RPL30P62888 115 aaKnown RBP17.99■□□□□ 0.47
SMPD1-209ENST00000533196 EIF4EBP1Q13541 118 aaPredicted RBP17.99■□□□□ 0.47
SMPD1-209ENST00000533196 KLF5Q13887 457 aaPredicted RBP17.99■□□□□ 0.47
SMPD1-209ENST00000533196 AUNIPQ9H7T9 357 aa17.99■□□□□ 0.47
SMPD1-209ENST00000533196 VCX3AQ9NNX9 186 aa17.99■□□□□ 0.47
SMPD1-209ENST00000533196 PEF1Q9UBV8 284 aaKnown RBP17.99■□□□□ 0.47
SMPD1-209ENST00000533196 KIR2DS2P43631 304 aa17.98■□□□□ 0.47
SMPD1-209ENST00000533196 DYRK1AQ13627 763 aa17.98■□□□□ 0.47
SMPD1-209ENST00000533196 MFSD4AQ8N468 514 aa17.98■□□□□ 0.47
SMPD1-209ENST00000533196 ZBTB34Q8NCN2 500 aa17.98■□□□□ 0.47
SMPD1-209ENST00000533196 ANKRD34BA5PLL1 514 aa17.97■□□□□ 0.47
SMPD1-209ENST00000533196 FAM223BA6NKX1 122 aa17.97■□□□□ 0.47
SMPD1-209ENST00000533196 IGLV1-51P01701 117 aa17.97■□□□□ 0.47
SMPD1-209ENST00000533196 TATDN3Q17R31 274 aa17.97■□□□□ 0.47
SMPD1-209ENST00000533196 SLC25A42Q86VD7 318 aa17.97■□□□□ 0.47
SMPD1-209ENST00000533196 FAM223AQ8IWN6 122 aa17.97■□□□□ 0.47
SMPD1-209ENST00000533196 TTC9CQ8N5M4 171 aa17.97■□□□□ 0.47
SMPD1-209ENST00000533196 TCTEX1D2Q8WW35 142 aa17.97■□□□□ 0.47
SMPD1-209ENST00000533196 TENM3Q9P273 2699 aa17.97■□□□□ 0.47
SMPD1-209ENST00000533196 OR2A4O95047 310 aa17.96■□□□□ 0.47
SMPD1-209ENST00000533196 FCGR2CP31995 323 aa17.96■□□□□ 0.47
SMPD1-209ENST00000533196 MAS1LP35410 378 aa17.96■□□□□ 0.47
SMPD1-209ENST00000533196 FAM209BQ5JX69 171 aa17.96■□□□□ 0.47
SMPD1-209ENST00000533196 ANKRD13BQ86YJ7 626 aa17.96■□□□□ 0.47
SMPD1-209ENST00000533196 PUSL1Q8N0Z8 303 aaKnown RBP17.96■□□□□ 0.47
SMPD1-209ENST00000533196 GVQW1Q8N7I0 195 aa17.96■□□□□ 0.47
SMPD1-209ENST00000533196 OR2A7Q96R45 310 aa17.96■□□□□ 0.47
SMPD1-209ENST00000533196 AIFM2Q9BRQ8 373 aa17.96■□□□□ 0.47
SMPD1-209ENST00000533196 A0A087WXM4 84 aa17.95■□□□□ 0.46
SMPD1-209ENST00000533196 TRBV9A0A0B4J1U6 114 aa17.95■□□□□ 0.46
SMPD1-209ENST00000533196 AIREO43918 545 aa17.95■□□□□ 0.46
SMPD1-209ENST00000533196 KBTBD11O94819 623 aa17.95■□□□□ 0.46
SMPD1-209ENST00000533196 HRASP01112 189 aa17.95■□□□□ 0.46
SMPD1-209ENST00000533196 APELAP0DMC3 54 aa17.95■□□□□ 0.46
SMPD1-209ENST00000533196 OR2B11Q5JQS5 317 aa17.95■□□□□ 0.46
SMPD1-209ENST00000533196 OR9G4Q8NGQ1 327 aa17.95■□□□□ 0.46
SMPD1-209ENST00000533196 OR13F1Q8NGS4 319 aa17.95■□□□□ 0.46
SMPD1-209ENST00000533196 TMEM167AQ8TBQ9 72 aa17.95■□□□□ 0.46
SMPD1-209ENST00000533196 SNAPC3Q92966 411 aa17.95■□□□□ 0.46
SMPD1-209ENST00000533196 S100A16Q96FQ6 103 aaKnown RBP17.95■□□□□ 0.46
SMPD1-209ENST00000533196 TAS2R8Q9NYW2 309 aa17.95■□□□□ 0.46
SMPD1-209ENST00000533196 XRCC3O43542 346 aa17.94■□□□□ 0.46
SMPD1-209ENST00000533196 PPYP01298 95 aa17.94■□□□□ 0.46
SMPD1-209ENST00000533196 RPEL1Q2QD12 228 aa17.94■□□□□ 0.46
SMPD1-209ENST00000533196 SIGLEC8Q9NYZ4 499 aa17.94■□□□□ 0.46
SMPD1-209ENST00000533196 ZNF257Q9Y2Q1 563 aa17.94■□□□□ 0.46
SMPD1-209ENST00000533196 RBFOX2O43251 390 aaKnown RBP eCLIP17.93■□□□□ 0.46
SMPD1-209ENST00000533196 TNFAIP8O95379 198 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 BRWD1-AS2P59051 145 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 RHOGP84095 191 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 ATP5G2Q06055 141 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 UBE2NLQ5JXB2 153 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 NECAP1Q8NC96 275 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 TSPAN14Q8NG11 270 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 OR5AP2Q8NGF4 316 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 SECTM1Q8WVN6 248 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 GIMAP1Q8WWP7 306 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 YIPF6Q96EC8 236 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 ASCL2Q99929 193 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 RSRP1Q9BUV0 290 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 AKIP1Q9NQ31 210 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 CCL28Q9NRJ3 127 aa17.93■□□□□ 0.46
SMPD1-209ENST00000533196 STAB2Q8WWQ8 2551 aa17.92■□□□□ 0.46
SMPD1-209ENST00000533196 RPL27AP46776 148 aaKnown RBP17.92■□□□□ 0.46
SMPD1-209ENST00000533196 SYNJ2BPP57105 145 aa17.92■□□□□ 0.46
SMPD1-209ENST00000533196 CATR1Q13166 79 aa17.92■□□□□ 0.46
SMPD1-209ENST00000533196 OR4A5Q8NH83 315 aa17.92■□□□□ 0.46
SMPD1-209ENST00000533196 BORCS5Q969J3 196 aa17.92■□□□□ 0.46
SMPD1-209ENST00000533196 HUWE1Q7Z6Z7 4374 aaKnown RBP17.92■□□□□ 0.46
SMPD1-209ENST00000533196 NPIPB5A8MRT5 1133 aa17.91■□□□□ 0.46
SMPD1-209ENST00000533196 H0Y980 276 aa17.91■□□□□ 0.46
SMPD1-209ENST00000533196 RBMXL2O75526 392 aaKnown RBP17.91■□□□□ 0.46
SMPD1-209ENST00000533196 RPS19P39019 145 aaKnown RBP17.91■□□□□ 0.46
SMPD1-209ENST00000533196 DEFA5Q01523 94 aa17.91■□□□□ 0.46
SMPD1-209ENST00000533196 ZNF45Q02386 682 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms