RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	OAF	Q86UD1	273 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	FUNDC1	Q8IVP5	155 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	STPG2	Q8N412	459 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	ZNF561	Q8N587	486 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	CD177	Q8N6Q3	437 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	OR5AP2	Q8NGF4	316 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	OR6K6	Q8NGW6	343 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	OR2T27	Q8NH04	317 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	RFESD	Q8TAC1	157 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	C4orf3	Q8WVX3	66 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	RASSF5	Q8WWW0	418 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	BAALC	Q8WXS3	180 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	OR5P3	Q8WZ94	311 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	SPTSSA	Q969W0	71 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	CENPN	Q96H22	339 aa	Predicted RBP	4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	OR8B4	Q96RC9	309 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	RASL12	Q9NYN1	266 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	LGALS13	Q9UHV8	139 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867	POLR1D	Q9Y2S0	133 aa		4.28	□□□□□ -1.72
PUM1-222	ENST00000531867		A0A087WYN8	130 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	LYRM9	A8MSI8	78 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	EFCAB9	A8MZ26	197 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	EVPLL	A8MZ36	301 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	LY6L	H3BQJ8	138 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	SMLR1	H3BR10	107 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	BMPR1B	O00238	502 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	SNRPC	P09234	159 aa	Known RBP	4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	ZNF728	P0DKX0	622 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	HTR1D	P28221	377 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	HTR1F	P30939	366 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	KIR3DL2	P43630	455 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	GZMM	P51124	257 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	ERVK-16	P61578	105 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	ACTA2	P62736	377 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	ACTG2	P63267	376 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	ACTC1	P68032	377 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	ACTA1	P68133	377 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	RUNX1	Q01196	453 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	KIAA0141	Q14154	515 aa	Predicted RBP	4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	WHAMMP3	Q1A5X7	153 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	TCF23	Q7RTU1	214 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	NRM	Q8IXM6	262 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	OR6V1	Q8N148	313 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	C5orf56	Q8N8D9	126 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	ZNF738	Q8NE65	137 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	OR4M1	Q8NGD0	313 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	OR5B3	Q8NH48	314 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	MYOZ3	Q8TDC0	251 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	RPE	Q96AT9	228 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	MICU1	Q9BPX6	476 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	KCTD14	Q9BQ13	255 aa	Predicted RBP	4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	RTL8A	Q9BWD3	113 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	OR51I2	Q9H344	312 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	ADGRL4	Q9HBW9	690 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	ABCB9	Q9NP78	766 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	ISYNA1	Q9NPH2	558 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	CLN6	Q9NWW5	311 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	MDFIC	Q9P1T7	246 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	DPM3	Q9P2X0	92 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	RCL1	Q9Y2P8	373 aa	Known RBP	4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	MOB4	Q9Y3A3	225 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	MPC1	Q9Y5U8	109 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867	HSPE1-MOB4	S4R3N1	261 aa		4.27	□□□□□ -1.73
PUM1-222	ENST00000531867		A0A1B0GVY2	172 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	FAM231B	A6NCW3	169 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	RFPL4A	A6NLU0	287 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	RFPL4AL1	F8VTS6	287 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867		I3L521	148 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	UBD	O15205	165 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	FGF16	O43320	207 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	IGLV1-47	P01700	117 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	IGLV2-11	P01706	119 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	OR8U8	P0C7N1	319 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	RD3L	P0DJH9	198 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	PSKH1	P11801	424 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	MFAP2	P55001	183 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	FXYD6P3	P58550	94 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	TAS2R60	P59551	318 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	DHODH	Q02127	395 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	DYNC1I2	Q13409	638 aa	Known RBP	4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	SNCB	Q16143	134 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	MUC21	Q5SSG8	566 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	LINC00242	Q5T6M2	205 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	FAHD1	Q6P587	224 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	DNM1P34	Q6PK57	102 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	ACP7	Q6ZNF0	438 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	IFT20	Q8IY31	132 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	BEST4	Q8NFU0	473 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	OR11H1	Q8NG94	326 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	OR6Q1	Q8NGQ2	317 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	OR2G2	Q8NGZ5	317 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	ZNF502	Q8TBZ5	544 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	RAB3C	Q96E17	227 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	NRIP2	Q9BQI9	281 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	COPS4	Q9BT78	406 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	CLEC7A	Q9BXN2	247 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	NAA50	Q9GZZ1	169 aa	Known RBP	4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	TMEM133	Q9H2Q1	129 aa		4.26	□□□□□ -1.73
PUM1-222	ENST00000531867	RERGL	Q9H628	205 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms