RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 C5orf66Q9H5L9 145 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 ISG20L2Q9H9L3 353 aaKnown RBP5.95□□□□□ -1.46
CD44-232ENST00000531118 PEX16Q9Y5Y5 336 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 IGHV4-28A0A0C4DH34 117 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 OR4C46A6NHA9 309 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 G3V2T6 193 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 ITGB1BP1O14713 200 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 PROP1O75360 226 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 SOX2P48431 317 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 DAPP51397 102 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 TMED1Q13445 227 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 ZNF585BQ52M93 769 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 SIGIRRQ6IA17 410 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 CLEC19AQ6UXS0 136 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 APRG1Q8IVJ8 170 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 SETD9Q8NE22 299 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 OR14A2Q96R54 314 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 PDCD1LG2Q9BQ51 273 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 NDUFAF3Q9BU61 184 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 SCRT1Q9BWW7 348 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 MRPL27Q9P0M9 148 aaKnown RBP5.94□□□□□ -1.46
CD44-232ENST00000531118 ABRACLQ9P1F3 81 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 RPL36Q9Y3U8 105 aaKnown RBP5.94□□□□□ -1.46
CD44-232ENST00000531118 AP4S1Q9Y587 144 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 S4R3C0 116 aa5.94□□□□□ -1.46
CD44-232ENST00000531118 DEFB131BA0A096LNP1 70 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 DAPL1A0PJW8 107 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 J3QLW9 94 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 M0R1X1 148 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 PDCD6O75340 191 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 BAG2O95816 211 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 IFNA10P01566 189 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 GLAP06280 429 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 ZNF19P17023 458 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 GALP22466 123 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 BDKRB2P30411 391 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 PPP3R1P63098 170 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 TMEM187Q14656 261 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 ATP6AP1Q15904 470 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 PRSS8Q16651 343 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 C10orf55Q5SWW7 151 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 TTC9CQ8N5M4 171 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 OR5AK2Q8NH90 309 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 ACOT12Q8WYK0 555 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 ZNF184Q99676 751 aaPredicted RBP5.93□□□□□ -1.46
CD44-232ENST00000531118 CHRDL1Q9BU40 450 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 C11orf54Q9H0W9 315 aaPredicted RBP5.93□□□□□ -1.46
CD44-232ENST00000531118 RIBC2Q9H4K1 309 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 TMEM138Q9NPI0 162 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 OR1A1Q9P1Q5 309 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 CELA1Q9UNI1 258 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 UFC1Q9Y3C8 167 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 LRRC42Q9Y546 428 aa5.93□□□□□ -1.46
CD44-232ENST00000531118 SRRM2Q9UQ35 2752 aaKnown RBP5.92□□□□□ -1.46
CD44-232ENST00000531118 SRRM4A7MD48 611 aaKnown RBP5.92□□□□□ -1.46
CD44-232ENST00000531118 J3QRE1 110 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 EBAG9O00559 213 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 CD2P06729 351 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 RPSAP08865 295 aaKnown RBP5.92□□□□□ -1.46
CD44-232ENST00000531118 MYOD1P15172 320 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 MGMTP16455 207 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 FUT3P21217 361 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 ELLP55199 621 aaPredicted RBP5.92□□□□□ -1.46
CD44-232ENST00000531118 MED21Q13503 144 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 GPR176Q14439 515 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 VMA21Q3ZAQ7 101 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 IDO2Q6ZQW0 420 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 TMEM190Q8WZ59 177 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 MUL1Q969V5 352 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 EEF1AKMT3Q96AZ1 226 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 SELENOIQ9C0D9 397 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 BANF2Q9H503 90 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 ZNF257Q9Y2Q1 563 aa5.92□□□□□ -1.46
CD44-232ENST00000531118 E9PI62 339 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 MIFP14174 115 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 UBE2KP61086 200 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 HLA-DRB3P79483 266 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 CBX3Q13185 183 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 AWAT2Q6E213 333 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 LAMTOR1Q6IAA8 161 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 ZFP1Q6P2D0 407 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 GLIPR1L1Q6UWM5 242 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 ZNF767PQ75MW2 155 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 MOB1BQ7L9L4 216 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 SPATA12Q7Z6I5 190 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 SLC25A42Q86VD7 318 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 SYS1Q8N2H4 156 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 CENPSQ8N2Z9 138 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 OR8J1Q8NGP2 316 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 RFKQ969G6 155 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 ORAI1Q96D31 301 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 CENPNQ96H22 339 aaPredicted RBP5.91□□□□□ -1.46
CD44-232ENST00000531118 SPIN2AQ99865 258 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 SPIN2BQ9BPZ2 258 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 ZNF430Q9H8G1 570 aaPredicted RBP5.91□□□□□ -1.46
CD44-232ENST00000531118 ZNF221Q9UK13 617 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 ORC6Q9Y5N6 252 aa5.91□□□□□ -1.46
CD44-232ENST00000531118 IGHV3-35A0A0C4DH35 117 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 MFSD2BA6NFX1 497 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 HMX3A6NHT5 357 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms