RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 TTC9CQ8N5M4 171 aa9.94□□□□□ -0.82
HIF3A-214ENST00000531043 OR10J5Q8NHC4 309 aa9.94□□□□□ -0.82
HIF3A-214ENST00000531043 FAM3DQ96BQ1 224 aa9.94□□□□□ -0.82
HIF3A-214ENST00000531043 CCDC140Q96MF4 163 aa9.94□□□□□ -0.82
HIF3A-214ENST00000531043 MND1Q9BWT6 205 aa9.94□□□□□ -0.82
HIF3A-214ENST00000531043 MLXQ9UH92 298 aa9.94□□□□□ -0.82
HIF3A-214ENST00000531043 TMEM213A2RRL7 107 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 TEX22C9J3V5 150 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 PTGES3LE9PB15 166 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 SCAF4O95104 1147 aaKnown RBP9.93□□□□□ -0.82
HIF3A-214ENST00000531043 NDUFB8O95169 186 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 RRASP10301 218 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 GNB3P16520 340 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 CBLN1P23435 193 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 OR2B11Q5JQS5 317 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 HES5Q5TA89 166 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 PACRGLQ8N7B6 248 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 NECAP1Q8NC96 275 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 ST6GALNAC5Q9BVH7 336 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 FBXL7Q9UJT9 491 aa9.93□□□□□ -0.82
HIF3A-214ENST00000531043 ELF5Q9UKW6 265 aaPredicted RBP9.93□□□□□ -0.82
HIF3A-214ENST00000531043 A0A0J9YWU9 116 aa9.92□□□□□ -0.82
HIF3A-214ENST00000531043 CXorf65A6NEN9 183 aa9.92□□□□□ -0.82
HIF3A-214ENST00000531043 DENRO43583 198 aaKnown RBP9.92□□□□□ -0.82
HIF3A-214ENST00000531043 GGCTO75223 188 aaKnown RBP9.92□□□□□ -0.82
HIF3A-214ENST00000531043 TUSC2O75896 110 aa9.92□□□□□ -0.82
HIF3A-214ENST00000531043 IL6RP08887 468 aaPredicted RBP9.92□□□□□ -0.82
HIF3A-214ENST00000531043 RPL30P62888 115 aaKnown RBP9.92□□□□□ -0.82
HIF3A-214ENST00000531043 CBX3Q13185 183 aa9.92□□□□□ -0.82
HIF3A-214ENST00000531043 IRF3Q14653 427 aa9.92□□□□□ -0.82
HIF3A-214ENST00000531043 CDK10Q15131 360 aa9.92□□□□□ -0.82
HIF3A-214ENST00000531043 MED22Q15528 200 aa9.92□□□□□ -0.82
HIF3A-214ENST00000531043 H1FOOQ8IZA3 346 aaPredicted RBP9.92□□□□□ -0.82
HIF3A-214ENST00000531043 RPP25LQ8N5L8 163 aaKnown RBP9.92□□□□□ -0.82
HIF3A-214ENST00000531043 OR56B1Q8NGI3 324 aa9.92□□□□□ -0.82
HIF3A-214ENST00000531043 KCTD12Q96CX2 325 aaKnown RBP9.92□□□□□ -0.82
HIF3A-214ENST00000531043 FANCD2OSQ96PS1 177 aa9.92□□□□□ -0.82
HIF3A-214ENST00000531043 GGTLC1Q9BX51 225 aa9.92□□□□□ -0.82
HIF3A-214ENST00000531043 TECRQ9NZ01 308 aaKnown RBP9.92□□□□□ -0.82
HIF3A-214ENST00000531043 RBM7Q9Y580 266 aaKnown RBP9.92□□□□□ -0.82
HIF3A-214ENST00000531043 A0A075B6Q4 140 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 LGALS9O00182 355 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 MFNGO00587 321 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 FCGR3BO75015 233 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 MYOD1P15172 320 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 AREGP15514 252 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 FABP5Q01469 135 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 ZNF57Q68EA5 555 aaPredicted RBP9.91□□□□□ -0.82
HIF3A-214ENST00000531043 CLEC19AQ6UXS0 136 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 GPHB5Q86YW7 130 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 OSR1Q8TAX0 266 aaPredicted RBP9.91□□□□□ -0.82
HIF3A-214ENST00000531043 UFD1Q92890 307 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 RAB3CQ96E17 227 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 ADTRPQ96IZ2 230 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 SPIN2AQ99865 258 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 SPIN2BQ9BPZ2 258 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 GINS4Q9BRT9 223 aa9.91□□□□□ -0.82
HIF3A-214ENST00000531043 VPS13DQ5THJ4 4388 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 LOC102724200A0A096LPH7 203 aaPredicted RBP9.9□□□□□ -0.82
HIF3A-214ENST00000531043 ZNF320A2RRD8 509 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 RAB27BO00194 218 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 ACTL6BO94805 426 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 IGLV2-14P01704 120 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 HSMCR30P0CW71 290 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 CALRP27797 417 aaKnown RBP9.9□□□□□ -0.82
HIF3A-214ENST00000531043 OR10A3P58181 314 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 TM4SF20Q53R12 229 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 BTNL8Q6UX41 500 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 UNQ9165/PRO28630Q6UXU0 137 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 SLC16A13Q7RTY0 426 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 MMD2Q8IY49 270 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 UXS1Q8NBZ7 420 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 OR52B4Q8NGK2 314 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 DCUN1D5Q9BTE7 237 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 RAB22AQ9UL26 194 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 ZNF257Q9Y2Q1 563 aa9.9□□□□□ -0.82
HIF3A-214ENST00000531043 IGKV1D-13A0A0B4J2D9 117 aa9.89□□□□□ -0.83
HIF3A-214ENST00000531043 DEDDO75618 318 aa9.89□□□□□ -0.83
HIF3A-214ENST00000531043 IGKV1-13P0DP09 117 aa9.89□□□□□ -0.83
HIF3A-214ENST00000531043 ARL3P36405 182 aa9.89□□□□□ -0.83
HIF3A-214ENST00000531043 BRWD1-AS2P59051 145 aa9.89□□□□□ -0.83
HIF3A-214ENST00000531043 TPBGQ13641 420 aa9.89□□□□□ -0.83
HIF3A-214ENST00000531043 RCN1Q15293 331 aa9.89□□□□□ -0.83
HIF3A-214ENST00000531043 CEMP1Q6PRD7 247 aaPredicted RBP9.89□□□□□ -0.83
HIF3A-214ENST00000531043 OR10R2Q8NGX6 335 aa9.89□□□□□ -0.83
HIF3A-214ENST00000531043 FYTTD1Q96QD9 318 aaKnown RBP9.89□□□□□ -0.83
HIF3A-214ENST00000531043 GPHA2Q96T91 129 aa9.89□□□□□ -0.83
HIF3A-214ENST00000531043 C8orf4Q9NR00 106 aa9.89□□□□□ -0.83
HIF3A-214ENST00000531043 V9GY05 133 aa9.89□□□□□ -0.83
HIF3A-214ENST00000531043 KIAA1109Q2LD37 5005 aa9.88□□□□□ -0.83
HIF3A-214ENST00000531043 IGHV3-35A0A0C4DH35 117 aa9.88□□□□□ -0.83
HIF3A-214ENST00000531043 MFSD2BA6NFX1 497 aa9.88□□□□□ -0.83
HIF3A-214ENST00000531043 CGB1A6NKQ9 187 aa9.88□□□□□ -0.83
HIF3A-214ENST00000531043 NPIPB5A8MRT5 1133 aa9.88□□□□□ -0.83
HIF3A-214ENST00000531043 DIRAS3O95661 229 aa9.88□□□□□ -0.83
HIF3A-214ENST00000531043 REG1AP05451 166 aa9.88□□□□□ -0.83
HIF3A-214ENST00000531043 HIST1H1DP16402 221 aaKnown RBP9.88□□□□□ -0.83
HIF3A-214ENST00000531043 NFYAP23511 347 aaPredicted RBP9.88□□□□□ -0.83
HIF3A-214ENST00000531043 RPL27AP46776 148 aaKnown RBP9.88□□□□□ -0.83
HIF3A-214ENST00000531043 MRPS15P82914 257 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms