RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 CEACAM4O75871 244 aa6.26□□□□□ -1.41
CTNND1-229ENST00000531014 CRYBB3P26998 211 aa6.26□□□□□ -1.41
CTNND1-229ENST00000531014 C2orf82Q6UX34 121 aa6.26□□□□□ -1.41
CTNND1-229ENST00000531014 DIRC2Q96SL1 478 aa6.26□□□□□ -1.41
CTNND1-229ENST00000531014 OVOL2Q9BRP0 275 aa6.26□□□□□ -1.41
CTNND1-229ENST00000531014 SH3BGRL3Q9H299 93 aa6.26□□□□□ -1.41
CTNND1-229ENST00000531014 ST20Q9HBF5 79 aa6.26□□□□□ -1.41
CTNND1-229ENST00000531014 FSCN3Q9NQT6 498 aa6.26□□□□□ -1.41
CTNND1-229ENST00000531014 PSME4Q14997 1843 aa6.26□□□□□ -1.41
CTNND1-229ENST00000531014 PRRC2BQ5JSZ5 2229 aaKnown RBP6.25□□□□□ -1.41
CTNND1-229ENST00000531014 ATAD5Q96QE3 1844 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-229ENST00000531014 CCL21O00585 134 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 SNRPCP09234 159 aaKnown RBP6.25□□□□□ -1.41
CTNND1-229ENST00000531014 CXCL2P19875 107 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 ASIPP42127 132 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 RPL27AP46776 148 aaKnown RBP6.25□□□□□ -1.41
CTNND1-229ENST00000531014 ZNF83P51522 516 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 RPS11P62280 158 aaKnown RBP eCLIP6.25□□□□□ -1.41
CTNND1-229ENST00000531014 RBMY1FQ15415 496 aaKnown RBP6.25□□□□□ -1.41
CTNND1-229ENST00000531014 ZNF660Q6AZW8 331 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-229ENST00000531014 GAGE2AQ6NT46 116 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 FDCSPQ8NFU4 85 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 TAF15Q92804 592 aaKnown RBP eCLIP6.25□□□□□ -1.413e-8■■■□□ 14.9
CTNND1-229ENST00000531014 C10orf35Q96D05 121 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 MVB12AQ96EY5 273 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 VKORC1Q9BQB6 163 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 FOXD3Q9UJU5 478 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-229ENST00000531014 SIGLEC7Q9Y286 467 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 PRR19A6NJB7 356 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 F8WEM9 126 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 NCR2O95944 276 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 ZNF32P17041 273 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 ZNF774Q6NX45 483 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 PAQR9Q6ZVX9 377 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 ADAD2Q8NCV1 583 aaKnown RBP6.25□□□□□ -1.41
CTNND1-229ENST00000531014 LRRC61Q9BV99 259 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 C19orf24Q9BVV8 132 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 CST9LQ9H4G1 147 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 MMP25Q9NPA2 562 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 CCL27Q9Y4X3 112 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 KLF12Q9Y4X4 402 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 V9GYH0 126 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 CAPZBP47756 277 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 INSL4Q14641 139 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 SEPSECSQ9HD40 501 aaKnown RBP6.25□□□□□ -1.41
CTNND1-229ENST00000531014 TRAV9-1A0A075B6T8 112 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 SOCS1O15524 211 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 CD8AP01732 235 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 C5orf47Q569G3 176 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 VAX1Q5SQQ9 334 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 SAP25Q8TEE9 199 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 SLC26A1Q9H2B4 701 aa6.25□□□□□ -1.41
CTNND1-229ENST00000531014 SLC25A10Q9UBX3 287 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-229ENST00000531014 TRAV30A0A087WSZ9 112 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 C1QL1O75973 258 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 ZNF688P0C7X2 276 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 MALP21145 153 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 LY6DQ14210 128 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 GPR146Q96CH1 333 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 DPM2O94777 84 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 APELAP0DMC3 54 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 GATD1Q8NB37 220 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 ZNF114Q8NC26 417 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 SSBP3Q9BWW4 388 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-229ENST00000531014 JPT2Q9H910 190 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 IL36BQ9NZH7 164 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 MICAL3Q7RTP6 2002 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 ITGB1BP1O14713 200 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 SPINT1O43278 529 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 CD1AP06126 327 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 C1QTNF9P0C862 333 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 DUTP33316 252 aaKnown RBP6.24□□□□□ -1.41
CTNND1-229ENST00000531014 C1orf220Q5T0J3 134 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 MIC13Q5XKP0 118 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 LINC00596Q86U02 117 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 APCDD1LQ8NCL9 501 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 OR51G1Q8NGK1 321 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 DLX4Q92988 240 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-229ENST00000531014 NPCDR1Q9BY65 106 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 RNF122Q9H9V4 155 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 NRN1Q9NPD7 142 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 CISD3P0C7P0 127 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 EFNB2P52799 333 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 DPTQ07507 201 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 C1orf122Q6ZSJ8 110 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 C17orf47Q8NEP4 570 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 EAF1Q96JC9 268 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-229ENST00000531014 TMEFF2Q9UIK5 374 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-229ENST00000531014 ANAPC10Q9UM13 185 aa6.24□□□□□ -1.41
CTNND1-229ENST00000531014 TRAV24A0A0B4J272 114 aa6.23□□□□□ -1.41
CTNND1-229ENST00000531014 A0A0B4J2E0 115 aa6.23□□□□□ -1.41
CTNND1-229ENST00000531014 A0A0G2JLM5 398 aa6.23□□□□□ -1.41
CTNND1-229ENST00000531014 A0A1B0GUT8 65 aa6.23□□□□□ -1.41
CTNND1-229ENST00000531014 A0A1B0GX12 115 aa6.23□□□□□ -1.41
CTNND1-229ENST00000531014 H0Y980 276 aa6.23□□□□□ -1.41
CTNND1-229ENST00000531014 PLA2G10O15496 165 aa6.23□□□□□ -1.41
CTNND1-229ENST00000531014 GJB3O75712 270 aa6.23□□□□□ -1.41
CTNND1-229ENST00000531014 ARL14EPLP0DKL9 152 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms