RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 VAX1Q5SQQ9 334 aa9.91□□□□□ -0.82
CCDC90B-216ENST00000529856 PYHIN1Q6K0P9 492 aa9.91□□□□□ -0.82
CCDC90B-216ENST00000529856 LCNL1Q6ZST4 164 aa9.91□□□□□ -0.82
CCDC90B-216ENST00000529856 TCTEX1D1Q8N7M0 179 aa9.91□□□□□ -0.82
CCDC90B-216ENST00000529856 OR4S2Q8NH73 311 aa9.91□□□□□ -0.82
CCDC90B-216ENST00000529856 ABHD5Q8WTS1 349 aa9.91□□□□□ -0.82
CCDC90B-216ENST00000529856 M0QYG6 137 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 CTDSPLO15194 276 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 CNIH1O95406 144 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 TNFSF8P32971 234 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 KIR2DS2P43631 304 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 SSBP1Q04837 148 aaKnown RBP9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 CATR1Q13166 79 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 ECSCRQ19T08 205 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 LPCAT3Q6P1A2 487 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 UNQ5815/PRO19632Q6UWF5 114 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 IDO2Q6ZQW0 420 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 C18orf65Q6ZTR6 163 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 ZNF695Q8IW36 515 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 MYOZ3Q8TDC0 251 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 ARPC1AQ92747 370 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 SOSTQ9BQB4 213 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 FAM103A1Q9BTL3 118 aaKnown RBP9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 FXYD6Q9H0Q3 95 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 KLK15Q9H2R5 256 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 FOXA2Q9Y261 457 aaPredicted RBP9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 A3GALT2U3KPV4 340 aa9.9□□□□□ -0.82
CCDC90B-216ENST00000529856 TNCP24821 2201 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 NUDT19A8MXV4 375 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 RBFOX2O43251 390 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 SOX15O60248 233 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 PGLYRP1O75594 196 aaPredicted RBP9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 CD3DP04234 171 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 IFNA6P05013 189 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 SAA1P0DJI8 122 aaPredicted RBP9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 TBPP20226 339 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 RAB9AP51151 201 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 UCP3P55916 312 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 GNB1P62873 340 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 IL18Q14116 193 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 KIAA0141Q14154 515 aaPredicted RBP9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 RNASE10Q5GAN6 216 aaKnown RBP9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 TMEM65Q6PI78 240 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 C8orf86Q6ZUL3 223 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 SPAG16Q8N0X2 631 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 TMEM229BQ8NBD8 167 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 KLHL30-AS1Q8NEE0 82 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 LFNGQ8NES3 379 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 WFDC9Q8NEX5 89 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 GRPEL2Q8TAA5 225 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 SMIM4Q8WVI0 70 aa9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 TINAGL1Q9GZM7 467 aaPredicted RBP9.89□□□□□ -0.83
CCDC90B-216ENST00000529856 A0A1W2PN81 502 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 GPR31O00270 319 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 RAMP3O60896 148 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 OR2A4O95047 310 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 HRASP01112 189 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 PF4P02776 101 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 CD74P04233 296 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 CHRNA7P36544 502 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 TAS2R19P59542 299 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 AADACL3Q5VUY0 350 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 ETV3LQ6ZN32 361 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 MMD2Q8IY49 270 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 CMTM1Q8IZ96 169 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 VKORC1L1Q8N0U8 176 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 PUSL1Q8N0Z8 303 aaKnown RBP9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 ZNF491Q8N8L2 437 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 OR5M8Q8NGP6 311 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 OR51H1Q8NH63 302 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 VSTM2AQ8TAG5 236 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 CD300LFQ8TDQ1 290 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 RHOVQ96L33 236 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 OR2A7Q96R45 310 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 RSRP1Q9BUV0 290 aa9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 ZNF430Q9H8G1 570 aaPredicted RBP9.88□□□□□ -0.83
CCDC90B-216ENST00000529856 FABP12A6NFH5 140 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 MSGN1A6NI15 193 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 GSTZ1O43708 216 aaPredicted RBP9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 CREBL2O60519 120 aaPredicted RBP9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 KBTBD11O94819 623 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 HPRT1P00492 218 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 MYCNOSP40205 109 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 TNXAQ16473 311 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 STEAP1BQ6NZ63 245 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 LHFPL1Q86WI0 220 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 SLC38A6Q8IZM9 456 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 ARRDC1Q8N5I2 433 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 POC5Q8NA72 575 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 TMEM167AQ8TBQ9 72 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 DGCR14Q96DF8 476 aaKnown RBP9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 UBE2E2Q96LR5 201 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 TMEM68Q96MH6 324 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 AIFM2Q9BRQ8 373 aa9.87□□□□□ -0.83
CCDC90B-216ENST00000529856 ACTL6BO94805 426 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 RAB3DO95716 219 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 RLN1P04808 185 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 CD33P20138 364 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 F2RP25116 425 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 TAS2R31P59538 309 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms