RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 ARSJQ5FYB0 599 aaPredicted RBP11.09□□□□□ -0.63
USF1-209ENST00000529476 VKORC1L1Q8N0U8 176 aa11.09□□□□□ -0.63
USF1-209ENST00000529476 CCDC71LQ8N9Z2 235 aa11.09□□□□□ -0.63
USF1-209ENST00000529476 CD300LFQ8TDQ1 290 aa11.09□□□□□ -0.63
USF1-209ENST00000529476 CLCC1Q96S66 551 aa11.09□□□□□ -0.63
USF1-209ENST00000529476 HSPB9Q9BQS6 159 aa11.09□□□□□ -0.63
USF1-209ENST00000529476 C7orf50Q9BRJ6 194 aaKnown RBP11.09□□□□□ -0.63
USF1-209ENST00000529476 BEX1Q9HBH7 125 aa11.09□□□□□ -0.63
USF1-209ENST00000529476 PLXNB1O43157 2135 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 CLPSL1A2RUU4 121 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 LINC01548A6NM66 108 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 CENPXA8MT69 81 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 LYRM1O43325 122 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 S1PR2O95136 353 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 HPRT1P00492 218 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 SAA1P0DJI8 122 aaPredicted RBP11.08□□□□□ -0.64
USF1-209ENST00000529476 LPAR6P43657 344 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 VDAC2P45880 294 aaPredicted RBP11.08□□□□□ -0.64
USF1-209ENST00000529476 UBE2KP61086 200 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 IFITM3Q01628 133 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 VMA21Q3ZAQ7 101 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 ZNF585BQ52M93 769 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 LIN54Q6MZP7 749 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 ADAD2Q8NCV1 583 aaKnown RBP11.08□□□□□ -0.64
USF1-209ENST00000529476 SCGB3A2Q96PL1 93 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 SLC25A21Q9BQT8 299 aaPredicted RBP11.08□□□□□ -0.64
USF1-209ENST00000529476 SERTAD4Q9NUC0 356 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 RNF114Q9Y508 228 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 MMP24Q9Y5R2 645 aa11.08□□□□□ -0.64
USF1-209ENST00000529476 IGHV7-81A0A0B4J1V7 117 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 TEX13DA0A0J9YY54 714 aaPredicted RBP11.07□□□□□ -0.64
USF1-209ENST00000529476 C3orf85A0A1B0GTC6 90 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 HRASP01112 189 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 IGHG2P01859 326 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 HLA-DRB1P01911 266 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 COMPP49747 757 aaPredicted RBP11.07□□□□□ -0.64
USF1-209ENST00000529476 RBMS2Q15434 407 aaKnown RBP11.07□□□□□ -0.64
USF1-209ENST00000529476 SP6Q3SY56 376 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 SSX9Q7RTT3 188 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 SLC35E3Q7Z769 313 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 TMED4Q7Z7H5 227 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 TCTEX1D1Q8N7M0 179 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 TMEM230Q96A57 120 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 TP53RKQ96S44 253 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 PLEKHA2Q9HB19 425 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 TBC1D24Q9ULP9 559 aa11.07□□□□□ -0.64
USF1-209ENST00000529476 A0A1B0GUS0 222 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 CRYM-AS1A6NIL9 109 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 H0Y980 276 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 NDUFB6O95139 128 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 CA2P00918 260 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 RPA2P15927 270 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 AKR1C4P17516 323 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 PROK1P58294 105 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 TAS2R31P59538 309 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 PJVKQ0ZLH3 352 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 MRGPRG-AS1Q2M3A8 158 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 PPP1R27Q86WC6 154 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 TEX45Q8NA69 505 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 R3HDM4Q96D70 268 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 RHOVQ96L33 236 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 NOL4LQ96MY1 436 aaPredicted RBP11.06□□□□□ -0.64
USF1-209ENST00000529476 NAA60Q9H7X0 242 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 LINC00527Q9UJ94 153 aa11.06□□□□□ -0.64
USF1-209ENST00000529476 OR2A4O95047 310 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 IGKV1-39P01597 117 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 IGKV1D-39P04432 117 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 SERPINE2P07093 398 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 OR5AC1P0C628 307 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 NQO2P16083 231 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 CX3CL1P78423 397 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 NDPQ00604 133 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 ASAH1Q13510 395 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 PUSL1Q8N0Z8 303 aaKnown RBP11.05□□□□□ -0.64
USF1-209ENST00000529476 KLHDC1Q8N7A1 406 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 OR2A7Q96R45 310 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 OR51J1Q9H342 316 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 FAM212BQ9NTI7 297 aaPredicted RBP11.05□□□□□ -0.64
USF1-209ENST00000529476 COMMD9Q9P000 198 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 FLVCR2Q9UPI3 526 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 TGP01266 2768 aa11.05□□□□□ -0.64
USF1-209ENST00000529476 TNCP24821 2201 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 MARCH11A6NNE9 402 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 ARPC1BO15143 372 aaKnown RBP11.04□□□□□ -0.64
USF1-209ENST00000529476 ATP6V0E1O15342 81 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 KBTBD11O94819 623 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 KRASP01116 189 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 G6PCP35575 357 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 KRTAP10-3P60369 221 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 GNB1P62873 340 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 SUPT4H1P63272 117 aaKnown RBP11.04□□□□□ -0.64
USF1-209ENST00000529476 SSBP2P81877 361 aaPredicted RBP11.04□□□□□ -0.64
USF1-209ENST00000529476 POU2AF1Q16633 256 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 PRSS8Q16651 343 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 OR4A47Q6IF82 309 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 C12orf54Q6X4T0 127 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 FOXRED2Q8IWF2 684 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 SGPP2Q8IWX5 399 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 CENPSQ8N2Z9 138 aa11.04□□□□□ -0.64
USF1-209ENST00000529476 DMBX1Q8NFW5 382 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms