RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 HTR1DP28221 377 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 BRS3P32247 399 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 CEACAM3P40198 252 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 ALDH3B2P48448 385 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 RBP2P50120 134 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 PPT1P50897 306 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 DAPP51397 102 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 ARHGDIBP52566 201 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 HCCSP53701 268 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 ACTA2P62736 377 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 GNGT1P63211 74 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 ACTG2P63267 376 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 ACTC1P68032 377 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 ACTA1P68133 377 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 SLC35A2P78381 396 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 UBE2V2Q15819 145 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 SSX2Q16385 188 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 LY6EQ16553 131 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 DNAL1Q4LDG9 190 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 SLC22A6Q4U2R8 563 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 BCL2L15Q5TBC7 163 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 TMEM244Q5VVB8 128 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 SLX4IPQ5VYV7 408 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 TMEM236Q5W0B7 351 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 TTC23Q5W5X9 447 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 C12orf73Q69YU5 71 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 KDM4DQ6B0I6 523 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 ZNF562Q6V9R5 426 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 HEPN1Q6WQI6 88 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 GDPD3Q7L5L3 318 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 TCF23Q7RTU1 214 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 PRSS48Q7RTY5 328 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 LHFPL4Q7Z7J7 247 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 GID4Q8IVV7 300 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 SLC35F2Q8IXU6 374 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 SAXO1Q8IYX7 474 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 DYNAPQ8N1N2 210 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 CHST4Q8NCG5 386 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 BBS1Q8NFJ9 593 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 OR4M1Q8NGD0 313 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 OR4P4Q8NGL7 312 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 TRUB1Q8WWH5 349 aaKnown RBP3.38□□□□□ -1.87
CSDE1-212ENST00000529046 EMG1Q92979 244 aaKnown RBP3.38□□□□□ -1.87
CSDE1-212ENST00000529046 FAM107BQ9H098 131 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 GAL3ST2Q9H3Q3 398 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 TVP23BQ9NYZ1 205 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 DPM3Q9P2X0 92 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 GLS2Q9UI32 602 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 MRM2Q9UI43 246 aaKnown RBP3.38□□□□□ -1.87
CSDE1-212ENST00000529046 HHLA2Q9UM44 414 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 TSSC4Q9Y5U2 329 aaPredicted RBP3.38□□□□□ -1.87
CSDE1-212ENST00000529046 PLXNB1O43157 2135 aa3.38□□□□□ -1.87
CSDE1-212ENST00000529046 IGKV1-27A0A075B6S5 117 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 TRBV7-9A0A0J9YWB2 115 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 A0A1W2PQL4 384 aaPredicted RBP3.37□□□□□ -1.87
CSDE1-212ENST00000529046 LEUTXA8MZ59 168 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 FGF16O43320 207 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 PRKYO43930 277 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 ENTPD6O75354 484 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 OR2F2O95006 317 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 HAND1O96004 215 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 CYB5AP00167 134 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 TFF1P04155 84 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 UBCP0CG48 685 aaKnown RBP3.37□□□□□ -1.87
CSDE1-212ENST00000529046 CGB3P0DN86 165 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 CGB7P0DN87 165 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 DBTP11182 482 aaKnown RBP3.37□□□□□ -1.87
CSDE1-212ENST00000529046 HTR1FP30939 366 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 VDAC2P45880 294 aaPredicted RBP3.37□□□□□ -1.87
CSDE1-212ENST00000529046 RAB13P51153 203 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 ATP1B3P54709 279 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 EDDM3BP56851 147 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 BLCAPP62952 87 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 PRB3Q04118 309 aaPredicted RBP3.37□□□□□ -1.87
CSDE1-212ENST00000529046 FLOT2Q14254 428 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 CNPY1Q3B7I2 92 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 VAX1Q5SQQ9 334 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 PLEKHG7Q6ZR37 379 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 ANGPTL5Q86XS5 388 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 HS3ST5Q8IZT8 346 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 FAM58AQ8N1B3 248 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 OSR2Q8N2R0 312 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 COMMD1Q8N668 190 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 ZNF676Q8N7Q3 588 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 ASCC1Q8N9N2 400 aaKnown RBP3.37□□□□□ -1.87
CSDE1-212ENST00000529046 OR5AU1Q8NGC0 362 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 OR10A7Q8NGE5 316 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 OR4X2Q8NGF9 303 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 HAVCR2Q8TDQ0 301 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 BORCS8Q96FH0 119 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 ZNF488Q96MN9 340 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 MBOAT4Q96T53 435 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 APOL4Q9BPW4 351 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 THTPAQ9BU02 230 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 COMMD4Q9H0A8 199 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 GABARAPL1Q9H0R8 117 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 MAGT1Q9H0U3 335 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 NEK6Q9HC98 313 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 HMG20AQ9NP66 347 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 IKZF2Q9UKS7 526 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms