RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 C1QL1O75973 258 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 PLAUP00749 431 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 APOA2P02652 100 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 SFTA3P0C7M3 94 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 IL3RAP26951 378 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 LOXP28300 417 aaPredicted RBP12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 FHITP49789 147 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 LINC00205P59089 165 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 TMEM155Q4W5P6 130 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 SP5Q6BEB4 398 aaPredicted RBP12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 OR8G2PQ6IF36 304 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 LYPD2Q6UXB3 125 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 OSR1Q8TAX0 266 aaPredicted RBP12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 NEU4Q8WWR8 484 aaPredicted RBP12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 MBD3L1Q8WWY6 194 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 LEAP2Q969E1 77 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 RHOVQ96L33 236 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 EIF5A2Q9GZV4 153 aaKnown RBP12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 SLC35D1Q9NTN3 355 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 CBLN4Q9NTU7 201 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 RALYQ9UKM9 306 aaKnown RBP12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 FBXO7Q9Y3I1 522 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 A0A1W2PPE3 182 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 C15orf61A6NNL5 157 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 FAM157AC9JC47 383 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 C17orf112F2Z3M2 114 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 MPDU1O75352 247 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 IGHV3-7P01780 117 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 RBP4P02753 201 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 IL6RP08887 468 aaPredicted RBP12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 CT45A6P0DMU7 189 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 CT45A5P0DMU8 189 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 CT45A7P0DMV0 189 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 ADCYAP1P18509 176 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 GNG10P50151 68 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 HSPE1P61604 102 aaKnown RBP12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 RAB11AP62491 216 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 RUNX1Q01196 453 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 TFF3Q07654 80 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 OR9G1Q8NH87 305 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 PCGF1Q9BSM1 259 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 SCRT1Q9BWW7 348 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 SLC35B3Q9H1N7 401 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 TMEM231Q9H6L2 316 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 ENY2Q9NPA8 101 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 FAM96BQ9Y3D0 163 aa12.11□□□□□ -0.47
ECHDC1-220ENST00000528402 RBFOX3A6NFN3 312 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 J3QR06 171 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 SIAH2O43255 324 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 ARG1P05089 322 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 GRNP28799 593 aaKnown RBP12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 VDAC2P45880 294 aaPredicted RBP12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 ZNF137PP52743 207 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 DLX6P56179 175 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 PMS2P11Q13670 270 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 TMEM41BQ5BJD5 291 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 OR4A47Q6IF82 309 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 SPSB3Q6PJ21 355 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 C1orf229Q6ZS94 237 aaPredicted RBP12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 ZNF709Q8N972 641 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 OR4A5Q8NH83 315 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 HEYLQ9NQ87 328 aaPredicted RBP12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 TMEM14BQ9NUH8 114 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 BET1LQ9NYM9 111 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 CTSZQ9UBR2 303 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 MIOXQ9UGB7 285 aa12.1□□□□□ -0.47
ECHDC1-220ENST00000528402 DSPP15924 2871 aaKnown RBP12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 CFAP47Q6ZTR5 3102 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 hCG_1809904A0A1W2PP81 198 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 A0A1W2PPE2 198 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 A0A1W2PR64 198 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 A0A1W2PRV1 198 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 IGHV2-70P01814 119 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 MC5RP33032 325 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 OR2B8PP59922 312 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 C4orf17Q53FE4 359 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 SSX9Q7RTT3 188 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 OR5AN1Q8NGI8 311 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 OR13D1Q8NGV5 346 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 OR10X1Q8NGY0 326 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 SFT2D1Q8WV19 159 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 ZDHHC16Q969W1 377 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 TIMD4Q96H15 378 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 MS4A7Q9GZW8 240 aaPredicted RBP12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 TCF19Q9Y242 345 aa12.09□□□□□ -0.47
ECHDC1-220ENST00000528402 C15orf62A8K5M9 175 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 HAX1O00165 279 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 UPK2O00526 184 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 IFNA10P01566 189 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 CCL3L1P16619 93 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 MDKP21741 143 aaPredicted RBP12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 COL8A2P25067 703 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 TAGLN2P37802 199 aaKnown RBP12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 PRRX1P54821 245 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 DLK1P80370 383 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 LY6DQ14210 128 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 TMEM177Q53S58 311 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 KHDC3LQ587J8 217 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 PDPNQ86YL7 162 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 VSTM2AQ8TAG5 236 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms