RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 SNAPC3Q92966 411 aa11.78□□□□□ -0.52
CLNS1A-210ENST00000528364 DCUN1D5Q9BTE7 237 aa11.78□□□□□ -0.52
CLNS1A-210ENST00000528364 TUBA4BQ9H853 241 aa11.78□□□□□ -0.52
CLNS1A-210ENST00000528364 NDUFB11Q9NX14 153 aa11.78□□□□□ -0.52
CLNS1A-210ENST00000528364 STARD9Q9P2P6 4700 aa11.77□□□□□ -0.53
CLNS1A-210ENST00000528364 IGKV1D-13A0A0B4J2D9 117 aa11.77□□□□□ -0.53
CLNS1A-210ENST00000528364 LCE6AA0A183 80 aa11.77□□□□□ -0.53
CLNS1A-210ENST00000528364 HMX3A6NHT5 357 aa11.77□□□□□ -0.53
CLNS1A-210ENST00000528364 IGKV1-13P0DP09 117 aa11.77□□□□□ -0.53
CLNS1A-210ENST00000528364 EDN2P20800 178 aa11.77□□□□□ -0.53
CLNS1A-210ENST00000528364 EXOSC2Q13868 293 aaKnown RBP11.77□□□□□ -0.53
CLNS1A-210ENST00000528364 IZUMO2Q6UXV1 221 aa11.77□□□□□ -0.53
CLNS1A-210ENST00000528364 OSR1Q8TAX0 266 aaPredicted RBP11.77□□□□□ -0.53
CLNS1A-210ENST00000528364 RETNQ9HD89 108 aa11.77□□□□□ -0.53
CLNS1A-210ENST00000528364 SELENOKQ9Y6D0 94 aa11.77□□□□□ -0.53
CLNS1A-210ENST00000528364 TRBV9A0A0B4J1U6 114 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 ZNF785A8K8V0 405 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 E7EUB6 86 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 TUSC2O75896 110 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 OR2J3O76001 311 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 IGLV2-14P01704 120 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 HLA-AP01891 365 aaKnown RBP11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 LCN12Q6JVE5 192 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 TTC9CQ8N5M4 171 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 NUDCD2Q8WVJ2 157 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 ISOC1Q96CN7 298 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 GPHA2Q96T91 129 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 SPATA25Q9BR10 227 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 SIGLEC8Q9NYZ4 499 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 RBMX2Q9Y388 322 aaKnown RBP11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 OR2W1Q9Y3N9 320 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 DMRT1Q9Y5R6 373 aa11.76□□□□□ -0.53
CLNS1A-210ENST00000528364 PPP5D1E7EU14 171 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 OR2A4O95047 310 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 HLA-DQB1P01920 261 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 IL6RP08887 468 aaPredicted RBP11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 DTYMKP23919 212 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 BRWD1-AS2P59051 145 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 CDK10Q15131 360 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 CD300EQ496F6 205 aaPredicted RBP11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 HACD4Q5VWC8 232 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 GTSCR1Q86UQ5 136 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 Q8N402 240 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 PLEKHA3Q9HB20 300 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 S4R3C0 116 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 CSMD3Q7Z407 3707 aa11.75□□□□□ -0.53
CLNS1A-210ENST00000528364 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 A0A1B0GW64 132 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 TMEM235A6NFC5 223 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 FAM223BA6NKX1 122 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 SSX5O60225 188 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 ACTL6BO94805 426 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 OR2C1O95371 312 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 IGHV3-23P01764 117 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 CD7P09564 240 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 KCTD9Q7L273 389 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 FAM223AQ8IWN6 122 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 MMD2Q8IY49 270 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 OR51E2Q9H255 320 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 TXNL4BQ9NX01 149 aaKnown RBP11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 PEMTQ9UBM1 199 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 SPATA2Q9UM82 520 aa11.74□□□□□ -0.53
CLNS1A-210ENST00000528364 TEX22C9J3V5 150 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 NDUFB8O95169 186 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 PTHLHP12272 177 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 MYOD1P15172 320 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 CD81P60033 236 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 EIF4EBP1Q13541 118 aaPredicted RBP11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 DEFB114Q30KQ6 69 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 C15orf32Q32M92 178 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 CNIH2Q6PI25 160 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 LINC00322Q6ZN03 302 aaPredicted RBP11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 DEFB125Q8N687 156 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 NECAP1Q8NC96 275 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 FYTTD1Q96QD9 318 aaKnown RBP11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 FAM110AQ9BQ89 295 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 WFDC10AQ9H1F0 79 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 DAPK2Q9UIK4 370 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 PRELID3BQ9Y3B1 194 aa11.73□□□□□ -0.53
CLNS1A-210ENST00000528364 DNAH1Q9P2D7 4330 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 RBMY1BA6NDE4 496 aaKnown RBP11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 RBMY1EA6NEQ0 496 aaKnown RBP11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 NOTOA8MTQ0 251 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 CTXN2P0C2S0 81 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 CLEC2LP0C7M8 214 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 RBMY1DP0C7P1 496 aaKnown RBP11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 PUSL1Q8N0Z8 303 aaKnown RBP11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 MFSD4AQ8N468 514 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 TCTEX1D2Q8WW35 142 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 NEURL2Q9BR09 285 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 CENPOQ9BU64 300 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 DCSTAMPQ9H295 470 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 HIPK2Q9H2X6 1198 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 TAS2R8Q9NYW2 309 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 FBXL7Q9UJT9 491 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 BLOC1S6Q9UL45 172 aa11.72□□□□□ -0.53
CLNS1A-210ENST00000528364 C2orf70A6NJV1 201 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms