RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 ZNF430Q9H8G1 570 aaPredicted RBP11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 Q9N2K0 584 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 RDH8Q9NYR8 311 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 FBXL17Q9UF56 701 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 A0A0A6YYD4 124 aa11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 FOXI3A8MTJ6 420 aaPredicted RBP11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 C11orf94C9JXX5 98 aa11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 MPPED1O15442 326 aa11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 CRYGCP07315 174 aa11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 CD37P11049 281 aa11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 UNC119Q13432 240 aa11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 TMPRSS11AQ6ZMR5 421 aa11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 IDO2Q6ZQW0 420 aa11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 CEACAM19Q7Z692 300 aa11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 APH1BQ8WW43 257 aa11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 RARRES2Q99969 163 aa11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 HDHD3Q9BSH5 251 aaPredicted RBP11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 UBQLN2Q9UHD9 624 aa11.88□□□□□ -0.51
CHMP4A-203ENST00000527154 LOC100130705A0A1B0GUX0 176 aa11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 SRMP19623 302 aa11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 DCKP27707 260 aa11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 ADMP35318 185 aa11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 RTL8BQ17RB0 113 aa11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 C10orf55Q5SWW7 151 aa11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 OR10K2Q6IF99 312 aa11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 ZFP1Q6P2D0 407 aa11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 CLEC19AQ6UXS0 136 aa11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 SETD9Q8NE22 299 aa11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 TMEM59Q9BXS4 323 aa11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 CHMP1AQ9HD42 196 aaPredicted RBP11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 AK3Q9UIJ7 227 aa11.87□□□□□ -0.51
CHMP4A-203ENST00000527154 A0A1B0GW64 132 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 A0A1W2PPK0 400 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 ZNF320A2RRD8 509 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 TMEM14DPA8MWL7 114 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 IGLL5B9A064 214 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 XRCC3O43542 346 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 IRF3Q14653 427 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 CDK10Q15131 360 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 C1orf100Q5SVJ3 147 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 C19orf35Q6ZS72 473 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 FAM89BQ8N5H3 189 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 OSR1Q8TAX0 266 aaPredicted RBP11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 ACOT12Q8WYK0 555 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 C9orf16Q9BUW7 83 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 ZNF436Q9C0F3 470 aaPredicted RBP11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 CSTL1Q9H114 145 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 HSF4Q9ULV5 492 aa11.86□□□□□ -0.51
CHMP4A-203ENST00000527154 CREBL2O60519 120 aaPredicted RBP11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 DIRAS3O95661 229 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 SAA1P0DJI8 122 aaPredicted RBP11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 MYOD1P15172 320 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 RPL35AP18077 110 aaKnown RBP11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 DUTP33316 252 aaKnown RBP11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 SERPINB10P48595 397 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 CBX3Q13185 183 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 SMN1Q16637 294 aaKnown RBP11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 LGALS9BQ3B8N2 356 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 ZNF585BQ52M93 769 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 ZNF575Q86XF7 245 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 MMD2Q8IY49 270 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 SETD6Q8TBK2 473 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 FYTTD1Q96QD9 318 aaKnown RBP11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 CABLES2Q9BTV7 478 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 OR2D2Q9H210 308 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 C12orf4Q9NQ89 552 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 SLC2A9Q9NRM0 540 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 PLEKHJ1Q9NW61 149 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 DNAH5Q8TE73 4624 aa11.85□□□□□ -0.51
CHMP4A-203ENST00000527154 LINC00473A8K010 186 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 E7EUB6 86 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 CDK2AP2O75956 126 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 IGHV3-23P01764 117 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 CD1AP06126 327 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 IL6RP08887 468 aaPredicted RBP11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 ZNF735P0CB33 412 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 MYL12AP19105 171 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 TPBGQ13641 420 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 OR11H2Q8NH07 326 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 EEF1AKMT3Q96AZ1 226 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 ADTRPQ96IZ2 230 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 LPAR5Q9H1C0 372 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 UFC1Q9Y3C8 167 aa11.84□□□□□ -0.51
CHMP4A-203ENST00000527154 IGLV11-55A0A075B6I3 123 aa11.83□□□□□ -0.52
CHMP4A-203ENST00000527154 TRBV7-1A0A0A6YYK4 115 aa11.83□□□□□ -0.52
CHMP4A-203ENST00000527154 HMX3A6NHT5 357 aa11.83□□□□□ -0.52
CHMP4A-203ENST00000527154 MPTX1A8MV57 137 aa11.83□□□□□ -0.52
CHMP4A-203ENST00000527154 WBP4O75554 376 aaKnown RBP11.83□□□□□ -0.52
CHMP4A-203ENST00000527154 CRYZL1O95825 349 aa11.83□□□□□ -0.52
CHMP4A-203ENST00000527154 TMEM50BP56557 158 aa11.83□□□□□ -0.52
CHMP4A-203ENST00000527154 ZFP41Q8N8Y5 198 aa11.83□□□□□ -0.52
CHMP4A-203ENST00000527154 TMEM190Q8WZ59 177 aa11.83□□□□□ -0.52
CHMP4A-203ENST00000527154 CLEC2DQ9UHP7 191 aa11.83□□□□□ -0.52
CHMP4A-203ENST00000527154 DIMT1Q9UNQ2 313 aaKnown RBP11.83□□□□□ -0.52
CHMP4A-203ENST00000527154 TRBV6-7A0A0A0MS04 114 aa11.82□□□□□ -0.52
CHMP4A-203ENST00000527154 IRGMA1A4Y4 181 aa11.82□□□□□ -0.52
CHMP4A-203ENST00000527154 TRDCB7Z8K6 153 aa11.82□□□□□ -0.52
CHMP4A-203ENST00000527154 EBAG9O00559 213 aa11.82□□□□□ -0.52
CHMP4A-203ENST00000527154 SOCS1O15524 211 aa11.82□□□□□ -0.52
CHMP4A-203ENST00000527154 ACTL6BO94805 426 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms