RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 SERPINE2P07093 398 aa13.15□□□□□ -0.3
CAPN1-205ENST00000526954 OR5AC1P0C628 307 aa13.15□□□□□ -0.3
CAPN1-205ENST00000526954 PSG5Q15238 335 aa13.15□□□□□ -0.3
CAPN1-205ENST00000526954 POU2AF1Q16633 256 aa13.15□□□□□ -0.3
CAPN1-205ENST00000526954 SP6Q3SY56 376 aa13.15□□□□□ -0.3
CAPN1-205ENST00000526954 PRIMA1Q86XR5 153 aa13.15□□□□□ -0.3
CAPN1-205ENST00000526954 CADM3Q8N126 398 aa13.15□□□□□ -0.3
CAPN1-205ENST00000526954 GLYATL2Q8WU03 294 aa13.15□□□□□ -0.3
CAPN1-205ENST00000526954 KIAA1456Q9P272 454 aa13.15□□□□□ -0.3
CAPN1-205ENST00000526954 SETD2Q9BYW2 2564 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-205ENST00000526954 TRAV6A0A075B6T7 132 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 PEX14O75381 377 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 S1PR2O95136 353 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 CDS2O95674 445 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 CRYGBP07316 175 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 H2AFB2P0C5Z0 115 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 NQO2P16083 231 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 ANXA7P20073 488 aaKnown RBP13.14□□□□□ -0.31
CAPN1-205ENST00000526954 RAG2P55895 527 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 UBE2KP61086 200 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 TMEM187Q14656 261 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 C5orf64Q2M2E5 130 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 TEX45Q8NA69 505 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 RHOVQ96L33 236 aa13.14□□□□□ -0.31
CAPN1-205ENST00000526954 NF1P21359 2839 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 IGKV1-39P01597 117 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 IGKV1D-39P04432 117 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 OR4E1P0C645 316 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 ANXA3P12429 323 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 PPP1R1AQ13522 171 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 VMA21Q3ZAQ7 101 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 PLET1Q6UQ28 207 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 TMEM56Q96MV1 263 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 MARVELD1Q9BSK0 173 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 NPFFR1Q9GZQ6 430 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 RANBP3Q9H6Z4 567 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-205ENST00000526954 METTL1Q9UBP6 276 aaKnown RBP13.13□□□□□ -0.31
CAPN1-205ENST00000526954 SIGLEC9Q9Y336 463 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 TMEM56-RWDD3S4R434 201 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 JMJD1CQ15652 2540 aa13.13□□□□□ -0.31
CAPN1-205ENST00000526954 SLC25A17O43808 307 aa13.12□□□□□ -0.31
CAPN1-205ENST00000526954 SFT2D2O95562 160 aa13.12□□□□□ -0.31
CAPN1-205ENST00000526954 CRYBA1P05813 215 aa13.12□□□□□ -0.31
CAPN1-205ENST00000526954 IL6RP08887 468 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-205ENST00000526954 SAA1P0DJI8 122 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-205ENST00000526954 PUSL1Q8N0Z8 303 aaKnown RBP13.12□□□□□ -0.31
CAPN1-205ENST00000526954 VSTM2AQ8TAG5 236 aa13.12□□□□□ -0.31
CAPN1-205ENST00000526954 IL22RA2Q969J5 263 aa13.12□□□□□ -0.31
CAPN1-205ENST00000526954 R3HDM4Q96D70 268 aa13.12□□□□□ -0.31
CAPN1-205ENST00000526954 SEC22AQ96IW7 307 aa13.12□□□□□ -0.31
CAPN1-205ENST00000526954 RASL11BQ9BPW5 248 aa13.12□□□□□ -0.31
CAPN1-205ENST00000526954 FBXL15Q9H469 300 aa13.12□□□□□ -0.31
CAPN1-205ENST00000526954 C9orf170A2RU37 121 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 MARCH11A6NNE9 402 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 TSPAN9O75954 239 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 OR2A4O95047 310 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 HLA-DRB1P01911 266 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 SPNP16150 400 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 VAMP1P23763 118 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 ERVK-16P61578 105 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 BLCAPP62952 87 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 SRPXP78539 464 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 SRSF2Q01130 221 aaKnown RBP13.11□□□□□ -0.31
CAPN1-205ENST00000526954 DHRS2Q13268 280 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 MRGPRG-AS1Q2M3A8 158 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 RGS21Q2M5E4 152 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 TRIM16LQ309B1 348 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 LIN54Q6MZP7 749 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 LYG2Q86SG7 212 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 PPP1R27Q86WC6 154 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 VKORC1L1Q8N0U8 176 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 Q8N2B8 174 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 LRTM2Q8N967 370 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 OR4A5Q8NH83 315 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 LHFPL5Q8TAF8 219 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 RBPMSQ93062 196 aaKnown RBP13.11□□□□□ -0.31
CAPN1-205ENST00000526954 OR2A7Q96R45 310 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 PRSS22Q9GZN4 317 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 BET1LQ9NYM9 111 aa13.11□□□□□ -0.31
CAPN1-205ENST00000526954 PIGBOS1A0A0B4J2F0 54 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 INMT-MINDY4F8WBC2 141 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 ATG12O94817 140 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 KBTBD11O94819 623 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 NDUFA7O95182 113 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 KRASP01116 189 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 HLA-AP01891 365 aaKnown RBP13.1□□□□□ -0.31
CAPN1-205ENST00000526954 IL5P05113 134 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 FGF2P09038 288 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 G6PCP35575 357 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 PLGLAQ15195 96 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 C4orf46Q504U0 113 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 OR4A47Q6IF82 309 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 SELENOHQ8IZQ5 122 aaKnown RBP13.1□□□□□ -0.31
CAPN1-205ENST00000526954 LGI3Q8N145 548 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 DMBX1Q8NFW5 382 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 TMEM167AQ8TBQ9 72 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 ZNF702PQ9H963 129 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 BEX1Q9HBH7 125 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 TPSG1Q9NRR2 321 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 TNCP24821 2201 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms