RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 UCP3P55916 312 aa9.39□□□□□ -0.91
VPS11-202ENST00000526829 SUPT4H1P63272 117 aaKnown RBP9.39□□□□□ -0.91
VPS11-202ENST00000526829 SMAGPQ0VAQ4 97 aa9.39□□□□□ -0.91
VPS11-202ENST00000526829 ZNF154Q13106 437 aa9.39□□□□□ -0.91
VPS11-202ENST00000526829 KCTD18Q6PI47 426 aaPredicted RBP9.39□□□□□ -0.91
VPS11-202ENST00000526829 CIARTQ8N365 385 aaPredicted RBP9.39□□□□□ -0.91
VPS11-202ENST00000526829 OR51A2Q8NGJ7 313 aa9.39□□□□□ -0.91
VPS11-202ENST00000526829 OR4C3Q8NH37 302 aa9.39□□□□□ -0.91
VPS11-202ENST00000526829 IGFBPL1Q8WX77 278 aa9.39□□□□□ -0.91
VPS11-202ENST00000526829 NEIL1Q96FI4 390 aaPredicted RBP9.39□□□□□ -0.91
VPS11-202ENST00000526829 TSPAN32Q96QS1 320 aa9.39□□□□□ -0.91
VPS11-202ENST00000526829 QTRT1Q9BXR0 403 aaKnown RBP9.39□□□□□ -0.91
VPS11-202ENST00000526829 CSDC2Q9Y534 153 aaKnown RBP9.39□□□□□ -0.91
VPS11-202ENST00000526829 BORCS7-ASMTA0A0B4J1R7 106 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 GAGE12BA1L429 117 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 SS18L1O75177 396 aaPredicted RBP9.38□□□□□ -0.91
VPS11-202ENST00000526829 ISG15P05161 165 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 DBHP09172 617 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 RPS27P42677 84 aaKnown RBP9.38□□□□□ -0.91
VPS11-202ENST00000526829 GPR6P46095 362 aaPredicted RBP9.38□□□□□ -0.91
VPS11-202ENST00000526829 SLC35A1P78382 337 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 QRFPP83859 136 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 MFGE8Q08431 387 aaPredicted RBP9.38□□□□□ -0.91
VPS11-202ENST00000526829 TNXAQ16473 311 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 SOHLH1Q5JUK2 328 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 C22orf34Q6ZV56 151 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 GGNQ86UU5 652 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 HS3ST6Q96QI5 342 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 GINS3Q9BRX5 216 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 RTBDNQ9BSG5 229 aaPredicted RBP9.38□□□□□ -0.91
VPS11-202ENST00000526829 ULBP2Q9BZM5 246 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 NELFAQ9H3P2 528 aa9.38□□□□□ -0.91
VPS11-202ENST00000526829 ROS1P08922 2347 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 A0A1B0GU03 582 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 A0A1W2PQD3 144 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 SERINC4A6NH21 518 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 H7C1C5 153 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 TNFSF11O14788 317 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 DEDDO75618 318 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 CTSDP07339 412 aaPredicted RBP9.37□□□□□ -0.91
VPS11-202ENST00000526829 LCN6P62502 163 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 PAFAH1B2P68402 229 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 RPL18Q07020 188 aaKnown RBP9.37□□□□□ -0.91
VPS11-202ENST00000526829 UNC119Q13432 240 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 POU2AF1Q16633 256 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 SLC25A26Q70HW3 274 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 UEVLDQ8IX04 471 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 FER1L6-AS1Q8NA97 138 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 SUMF2Q8NBJ7 301 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 GPR119Q8TDV5 335 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 TMEM18Q96B42 140 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 ZANQ9Y493 2812 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 A0A0J9YW62 118 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.37□□□□□ -0.91
VPS11-202ENST00000526829 XRCC2O43543 280 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 SRSF10O75494 262 aaKnown RBP9.37□□□□□ -0.91
VPS11-202ENST00000526829 THBDP07204 575 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 CFHR2P36980 270 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 GABRA2P47869 451 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 RNPS1Q15287 305 aaKnown RBP9.37□□□□□ -0.91
VPS11-202ENST00000526829 ELOBQ15370 118 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 CST9LP1Q5W188 147 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 LHFPL1Q86WI0 220 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 FAM219AQ8IW50 185 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 FKBP11Q9NYL4 201 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 BET1LQ9NYM9 111 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 R4GMQ9 66 aa9.37□□□□□ -0.91
VPS11-202ENST00000526829 CSPG4Q6UVK1 2322 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 HIVEP2P31629 2446 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 GNB3P16520 340 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 SFTPDP35247 375 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 GNG3P63215 75 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 ZNF117Q03924 483 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 GABRA6Q16445 453 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 FAM78BQ5VT40 261 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 ZNF101Q8IZC7 436 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 Q8WTZ3 238 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 PLPPR2Q96GM1 343 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 PSMG3Q9BT73 122 aaPredicted RBP9.36□□□□□ -0.91
VPS11-202ENST00000526829 Q9N2K0 584 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 HSF4Q9ULV5 492 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 B9D1Q9UPM9 204 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 LAMTOR2Q9Y2Q5 125 aa9.36□□□□□ -0.91
VPS11-202ENST00000526829 LOC107986453A0A1B0GWG9 222 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 OOEPA6NGQ2 149 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 P2RY10O00398 339 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 IGHG4P01861 327 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 VSIG8P0DPA2 414 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 P2RY1P47900 373 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 TMEM183BQ1AE95 376 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 PRIMA1Q86XR5 153 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 SLC22A24Q8N4F4 322 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 OR5A2Q8NGI9 324 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 SLC25A43Q8WUT9 341 aaPredicted RBP9.35□□□□□ -0.91
VPS11-202ENST00000526829 EMG1Q92979 244 aaKnown RBP9.35□□□□□ -0.91
VPS11-202ENST00000526829 RAB39BQ96DA2 213 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 OR11A1Q9GZK7 315 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 C1orf123Q9NWV4 160 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 CDC42EP3Q9UKI2 254 aa9.35□□□□□ -0.91
VPS11-202ENST00000526829 ANK3Q12955 4377 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms