RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, human

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF1-208	ENST00000526821	TCTEX1D1	Q8N7M0	179 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	SLC35G3	Q8N808	338 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	OR51H1	Q8NH63	302 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	PRSS3P2	Q8NHM4	247 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	PPP1R1C	Q8WVI7	109 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	H1FX	Q92522	213 aa	Known RBP	4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	RBPMS	Q93062	196 aa	Known RBP	4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	LEAP2	Q969E1	77 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	HSD17B10	Q99714	261 aa	Known RBP	4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	CCL19	Q99731	98 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	ARPC5L	Q9BPX5	153 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	ABHD14A	Q9BUJ0	271 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	PDCD10	Q9BUL8	212 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	RNF126	Q9BV68	326 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	METTL8	Q9H825	291 aa	Known RBP	4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	PLSCR3	Q9NRY6	295 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	KCNS2	Q9ULS6	477 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	RBM7	Q9Y580	266 aa	Known RBP	4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	TACC2	O95359	2948 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	FBN2	P35556	2912 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	PTPN13	Q12923	2485 aa		4.99	□□□□□ -1.61
ATPAF1-208	ENST00000526821	NBPF19	A0A087WUL8	3843 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	SAA2-SAA4	A0A096LPE2	208 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821		A0A0G2JRQ6	117 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	LOC102723971	A0A1B0GUV8	181 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	C13orf42	A0A1B0GVH6	325 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821		A8MXK9	166 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	FAM25E	A8MYX2	175 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821		J3QKU1	62 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	RAB29	O14966	203 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	PITX3	O75364	302 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	MPC2	O95563	127 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	IGKV1-5	P01602	117 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	IGHV2-5	P01817	119 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	SAA2	P0DJI9	122 aa	Predicted RBP	4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	IGHV1-8	P0DP01	117 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	SLC25A6	P12236	298 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	RPA2	P15927	270 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	CXCL2	P19875	107 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	VDAC1	P21796	283 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	NFYB	P25208	207 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	GPR12	P47775	334 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	ZNF137P	P52743	207 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	LMO4	P61968	165 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	IFITM2	Q01629	132 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	PAX2	Q02962	417 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	CATR1	Q13166	79 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	IAH1	Q2TAA2	248 aa	Predicted RBP	4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	RPL39P5	Q59GN2	51 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	NCR3LG1	Q68D85	454 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	C11orf87	Q6NUJ2	197 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	PRSS54	Q6PEW0	395 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	BTNL3	Q6UXE8	466 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	ZNF833P	Q6ZTB9	187 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	ZNF695	Q8IW36	515 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	ZNF525	Q8N782	197 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	OR4D5	Q8NGN0	318 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	GRPEL2	Q8TAA5	225 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	LSM10	Q969L4	123 aa	Known RBP	4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	ST6GALNAC6	Q969X2	333 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	RAB39B	Q96DA2	213 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	QTRT1	Q9BXR0	403 aa	Known RBP	4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	COMMD9	Q9P000	198 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	TNFSF18	Q9UNG2	199 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	SESN1	Q9Y6P5	492 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	CENPE	Q02224	2701 aa		4.98	□□□□□ -1.61
ATPAF1-208	ENST00000526821	PPIAL4C	A0A0B4J2A2	164 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821		A0A1B0GU03	582 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821		A0A1W2PPE3	182 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821		A0A1W2PPH5	198 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	RNF222	A6NCQ9	220 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821		J3QR06	171 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821		M0R1W7	72 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821		M0R1X1	148 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	NDUFS8	O00217	210 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	RAMP3	O60896	148 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	IGLV1-47	P01700	117 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	IGHV3-7	P01780	117 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	MBP	P02686	304 aa	Predicted RBP	4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	SERPINE2	P07093	398 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	LIPF	P07098	398 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	NHLRC4	P0CG21	123 aa	Predicted RBP	4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	PPIAL4G	P0DN37	164 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	LPAR6	P43657	344 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	THBS3	P49746	956 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	PDLIM4	P50479	330 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	LINC00205	P59089	165 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	GNB2	P62879	340 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	ZNF345	Q14585	488 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	FAM71F2	Q6NXP2	309 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	C1orf122	Q6ZSJ8	110 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	SPAG16	Q8N0X2	631 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821		Q8N7P7	452 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	ZNF383	Q8NA42	475 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	OR9G1	Q8NH87	305 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	CD300LF	Q8TDQ1	290 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	C10orf105	Q8TEF2	133 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	TCTEX1D2	Q8WW35	142 aa		4.97	□□□□□ -1.61
ATPAF1-208	ENST00000526821	TNFRSF14	Q92956	283 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms