RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CITED4Q96RK1 184 aa8.57□□□□□ -1.04
NEDD8-204ENST00000526430 ASCL2Q99929 193 aa8.57□□□□□ -1.04
NEDD8-204ENST00000526430 RTBDNQ9BSG5 229 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-204ENST00000526430 PRSS22Q9GZN4 317 aa8.57□□□□□ -1.04
NEDD8-204ENST00000526430 SLC2A8Q9NY64 477 aa8.57□□□□□ -1.04
NEDD8-204ENST00000526430 GPR132Q9UNW8 380 aa8.57□□□□□ -1.04
NEDD8-204ENST00000526430 SH2D7A6NKC9 451 aaPredicted RBP8.56□□□□□ -1.04
NEDD8-204ENST00000526430 LINC01548A6NM66 108 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 SLC22A5O76082 557 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 OR2F2O95006 317 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 MOSP00540 346 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 CRYGBP07316 175 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 CD40LGP29965 261 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 TSPAN5P62079 268 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 MEF2DQ14814 521 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 ZNF585BQ52M93 769 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 ADAMTSL5Q6ZMM2 481 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 TMEM17Q86X19 198 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 TOMM5Q8N4H5 51 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 FAM71E2Q8N5Q1 922 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 Q8N9W7 124 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 NPBQ8NG41 125 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 OR2T10Q8NGZ9 312 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 ABCB10Q9NRK6 738 aa8.56□□□□□ -1.04
NEDD8-204ENST00000526430 RBM7Q9Y580 266 aaKnown RBP8.56□□□□□ -1.04
NEDD8-204ENST00000526430 TNFSF12O43508 249 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 NDUFA3O95167 84 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 IFNA6P05013 189 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 IL6RP08887 468 aaPredicted RBP8.55□□□□□ -1.04
NEDD8-204ENST00000526430 FAM106CPP0CH98 169 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 PI3P19957 117 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 MC5RP33032 325 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 THBS3P49746 956 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 SSBP2P81877 361 aaPredicted RBP8.55□□□□□ -1.04
NEDD8-204ENST00000526430 TMEM177Q53S58 311 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 ZFAND6Q6FIF0 208 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 ZNF66Q6ZN08 573 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 MRPL41Q8IXM3 137 aaKnown RBP8.55□□□□□ -1.04
NEDD8-204ENST00000526430 C5orf56Q8N8D9 126 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 MARCH1Q8TCQ1 289 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 S100ZQ8WXG8 99 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 TMEM230Q96A57 120 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 SLC25A33Q9BSK2 321 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 C5orf66Q9H5L9 145 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 TBC1D24Q9ULP9 559 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 VSIG4Q9Y279 399 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 WASHC3Q9Y3C0 194 aa8.55□□□□□ -1.04
NEDD8-204ENST00000526430 TCRBV4S1A1TA0A5B7 111 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 GPR31O00270 319 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 FCN1O00602 326 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 JTBO76095 146 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 TMEM11P17152 192 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 VDAC2P45880 294 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-204ENST00000526430 HERV-K104P61576 105 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 ZNF846Q147U1 533 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 PSG5Q15238 335 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 ETV3LQ6ZN32 361 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 PDPNQ86YL7 162 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 DEDD2Q8WXF8 326 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 HSD17B10Q99714 261 aaKnown RBP8.54□□□□□ -1.04
NEDD8-204ENST00000526430 RNF5Q99942 180 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 CCDC32Q9BV29 185 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 SLC35D1Q9NTN3 355 aa8.54□□□□□ -1.04
NEDD8-204ENST00000526430 DISC1C4P0D8 188 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 FGF16O43320 207 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 UPK1BO75841 260 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 IGKV1-39P01597 117 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 IGKV1D-39P04432 117 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 CTSDP07339 412 aaPredicted RBP8.53□□□□□ -1.04
NEDD8-204ENST00000526430 CCR6P51684 374 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 RND3P61587 244 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 HES1Q14469 280 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 SCGB2B2Q4G0G5 96 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 PHLDA2Q53GA4 152 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 ARSJQ5FYB0 599 aaPredicted RBP8.53□□□□□ -1.04
NEDD8-204ENST00000526430 LPCAT3Q6P1A2 487 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 IDO2Q6ZQW0 420 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 C16orf82Q7Z2V1 217 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 SLC38A6Q8IZM9 456 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 ADAD2Q8NCV1 583 aaKnown RBP8.53□□□□□ -1.04
NEDD8-204ENST00000526430 ADTRPQ96IZ2 230 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 SLC2A9Q9NRM0 540 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 TPSG1Q9NRR2 321 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 PITPNC1Q9UKF7 332 aa8.53□□□□□ -1.04
NEDD8-204ENST00000526430 PLECQ15149 4684 aaKnown RBP8.52□□□□□ -1.05
NEDD8-204ENST00000526430 TNCP24821 2201 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 ALMS1Q8TCU4 4167 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 LINC00854A0A1B0GVQ3 168 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 MPPED1O15442 326 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 FCGR3BO75015 233 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 CRYZL1O95825 349 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 RLN1P04808 185 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 EGR2P11161 476 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-204ENST00000526430 F2RP25116 425 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 ARHGDIBP52566 201 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 SUPT4H1P63272 117 aaKnown RBP8.52□□□□□ -1.05
NEDD8-204ENST00000526430 TAGLNQ01995 201 aaKnown RBP8.52□□□□□ -1.05
NEDD8-204ENST00000526430 PJVKQ0ZLH3 352 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 SURF2Q15527 256 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-204ENST00000526430 TMEM95Q3KNT9 176 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms