RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 DCHS2Q6V1P9 2916 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 KIAA2026Q5HYC2 2103 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 TRGV10A0A0A0MS01 117 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 TRBV6-6A0A0A6YYG2 114 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 TRAV39A0A0B4J263 110 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 PPIAL4CA0A0B4J2A2 164 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 ODAMA1E959 279 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 MEIOCA2RUB1 952 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 TRDCB7Z8K6 153 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 PRSS46E5RG02 174 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 TEX46H3BTG2 121 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 GABARAPH6UMI1 98 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 ORC5O43913 435 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 FCN3O75636 299 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 NAPSAO96009 420 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 APOHP02749 345 aaPredicted RBP3.59□□□□□ -1.83
USP48-211ENST00000526044 CSN3P07498 182 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 GSTT2BP0CG30 244 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 PPIAL4GP0DN37 164 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 PTHLHP12272 177 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 RCC1P18754 421 aaPredicted RBP3.59□□□□□ -1.83
USP48-211ENST00000526044 DTYMKP23919 212 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 IL2RGP31785 369 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 ARF6P62330 175 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 DLK1P80370 383 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 PAX5Q02548 391 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 ZNF846Q147U1 533 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 KIAA1644Q3SXP7 199 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 C6orf183Q5T699 404 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 PRAMEF5Q5TYX0 476 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 RSBN1Q5VWQ0 802 aaPredicted RBP3.59□□□□□ -1.83
USP48-211ENST00000526044 CYB5R2Q6BCY4 276 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 ZNF880Q6PDB4 577 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 BTNL3Q6UXE8 466 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 TRAPPC6BQ86SZ2 158 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 HOGA1Q86XE5 327 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 GAPTQ8N292 157 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 TPRX1Q8N7U7 411 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 GDPD1Q8N9F7 314 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 MAPK1IP1LQ8NDC0 245 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 LY6G5BQ8NDX9 201 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 WFDC11Q8NEX6 87 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 C8orf46Q8TAG6 207 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 MRPL30Q8TCC3 161 aaKnown RBP3.59□□□□□ -1.83
USP48-211ENST00000526044 MRGPRDQ8TDS7 321 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 GPX8Q8TED1 209 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 TMEM190Q8WZ59 177 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 ARL11Q969Q4 196 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 GALMQ96C23 342 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 COQ2Q96H96 371 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 TSC22D3Q99576 134 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 HDHD3Q9BSH5 251 aaPredicted RBP3.59□□□□□ -1.83
USP48-211ENST00000526044 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 GAL3ST2Q9H3Q3 398 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 Q9N2K0 584 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 C12orf4Q9NQ89 552 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 IFT46Q9NQC8 304 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 C19orf12Q9NSK7 152 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 KLK11Q9UBX7 282 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 OPN4Q9UHM6 478 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 ZNF230Q9UIE0 474 aaPredicted RBP3.59□□□□□ -1.83
USP48-211ENST00000526044 RPUSD1Q9UJJ7 312 aaKnown RBP3.59□□□□□ -1.83
USP48-211ENST00000526044 MGAT4AQ9UM21 535 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 RNF24Q9Y225 148 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 LINC00312Q9Y6C7 94 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 GCN1Q92616 2671 aaKnown RBP3.59□□□□□ -1.83
USP48-211ENST00000526044 DSCAML1Q8TD84 2053 aa3.59□□□□□ -1.83
USP48-211ENST00000526044 CELSR2Q9HCU4 2923 aa3.59□□□□□ -1.84
USP48-211ENST00000526044 USP9YO00507 2555 aaPredicted RBP3.58□□□□□ -1.84
USP48-211ENST00000526044 ARID1AO14497 2285 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 SPTAN1Q13813 2472 aaKnown RBP3.58□□□□□ -1.84
USP48-211ENST00000526044 A0A096LNT2 108 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 IGHV2-70DA0A0C4DH43 119 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 KBTBD11-OT1A0A1B0GTJ5 212 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 MEIS3P1A6NDR6 274 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 ZNF729A6NN14 1252 aaPredicted RBP3.58□□□□□ -1.84
USP48-211ENST00000526044 A8MXK9 166 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 C15orf65H3BRN8 121 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 GSTZ1O43708 216 aaPredicted RBP3.58□□□□□ -1.84
USP48-211ENST00000526044 ENSAO43768 121 aaKnown RBP3.58□□□□□ -1.84
USP48-211ENST00000526044 FCER2P06734 321 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 MSMBP08118 114 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 FCGR3AP08637 254 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 SCTP09683 121 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 CTXN2P0C2S0 81 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 GSTT2P0CG29 244 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 ZNF728P0DKX0 622 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 CGB3P0DN86 165 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 CGB7P0DN87 165 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 RRASP10301 218 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 CD40LGP29965 261 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 RCVRNP35243 200 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 KIR2DS4P43632 304 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 IER3P46695 156 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 OR3A3P47888 321 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 INPP1P49441 399 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 ARHGDIBP52566 201 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 RPL23AP62750 156 aaKnown RBP3.58□□□□□ -1.84
USP48-211ENST00000526044 GNB1P62873 340 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 SSBP1Q04837 148 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms