RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 CNIH1O95406 144 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 BRI3O95415 125 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 CA2P00918 260 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 IGLV1-51P01701 117 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 TRBV12-3P01733 135 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 EIF4EP06730 217 aaKnown RBP5.02□□□□□ -1.61
CD44-221ENST00000526000 GNB3P16520 340 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 ELK1P19419 428 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 TBPP20226 339 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 CD40LGP29965 261 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 HTD2P86397 168 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 ZNF45Q02386 682 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 PJVKQ0ZLH3 352 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 PLA2G7Q13093 441 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 DYRK1AQ13627 763 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 FXYD3Q14802 87 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 PSG5Q15238 335 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 CNPY1Q3B7I2 92 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 MOGAT2Q3SYC2 334 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 C19orf54Q5BKX5 351 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 CNIH2Q6PI25 160 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 ZNF833PQ6ZTB9 187 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 CCDC190Q86UF4 302 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 OR2AK2Q8NG84 335 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 OR4A4PQ8NGN8 299 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 S100ZQ8WXG8 99 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 GALMQ96C23 342 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 YPEL2Q96QA6 119 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 SOSTQ9BQB4 213 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 MIXL1Q9H2W2 232 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 PLEKHA3Q9HB20 300 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 Q9N2K0 584 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 OR1A1Q9P1Q5 309 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 EXTL2Q9UBQ6 330 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 AK3Q9UIJ7 227 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 KCNK7Q9Y2U2 307 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 RYR2Q92736 4967 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 SACSQ9NZJ4 4579 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 TMEM235A6NFC5 223 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 FABP12A6NFH5 140 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 TRDCB7Z8K6 153 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 H0YJW9 148 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 GABARAPH6UMI1 98 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 ARPC1BO15143 372 aaKnown RBP5.01□□□□□ -1.61
CD44-221ENST00000526000 GSTZ1O43708 216 aaPredicted RBP5.01□□□□□ -1.61
CD44-221ENST00000526000 SLC25A17O43808 307 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 HLA-DQB1P01920 261 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 CSN3P07498 182 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 FCGR3AP08637 254 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 NAT1P18440 290 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 TNFSF8P32971 234 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 RCVRNP35243 200 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 CEACAM6P40199 344 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 TAS2R46P59540 309 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 HLA-DRB3P79483 266 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 KLF5Q13887 457 aaPredicted RBP5.01□□□□□ -1.61
CD44-221ENST00000526000 HMGN3Q15651 99 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 IL34Q6ZMJ4 242 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 HOGA1Q86XE5 327 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 LAX1Q8IWV1 398 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 DEFB125Q8N687 156 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 GDPD1Q8N9F7 314 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 GPX8Q8TED1 209 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 SMIM4Q8WVI0 70 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 HDHD3Q9BSH5 251 aaPredicted RBP5.01□□□□□ -1.61
CD44-221ENST00000526000 CABLES2Q9BTV7 478 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 C11orf54Q9H0W9 315 aaPredicted RBP5.01□□□□□ -1.61
CD44-221ENST00000526000 WFDC10AQ9H1F0 79 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 IFI27L2Q9H2X8 130 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 RANGRFQ9HD47 186 aaPredicted RBP5.01□□□□□ -1.61
CD44-221ENST00000526000 TAS2R8Q9NYW2 309 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 SLC23A1Q9UHI7 598 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 ZNF580Q9UK33 172 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 JPT1Q9UK76 154 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 ANAPC10Q9UM13 185 aa5.01□□□□□ -1.61
CD44-221ENST00000526000 EPPK1P58107 5090 aaKnown RBP5.01□□□□□ -1.61
CD44-221ENST00000526000 H0Y980 276 aa5□□□□□ -1.61
CD44-221ENST00000526000 J3QRK9 145 aa5□□□□□ -1.61
CD44-221ENST00000526000 RAB29O14966 203 aa5□□□□□ -1.61
CD44-221ENST00000526000 FABP7O15540 132 aa5□□□□□ -1.61
CD44-221ENST00000526000 PROP1O75360 226 aa5□□□□□ -1.61
CD44-221ENST00000526000 RBMXL2O75526 392 aaKnown RBP5□□□□□ -1.61
CD44-221ENST00000526000 RBBP9O75884 186 aa5□□□□□ -1.61
CD44-221ENST00000526000 SLC22A5O76082 557 aa5□□□□□ -1.61
CD44-221ENST00000526000 LY6G6CO95867 125 aa5□□□□□ -1.61
CD44-221ENST00000526000 PRH1P02810 166 aa5□□□□□ -1.61
CD44-221ENST00000526000 CD7P09564 240 aa5□□□□□ -1.61
CD44-221ENST00000526000 SCTP09683 121 aa5□□□□□ -1.61
CD44-221ENST00000526000 GSTT2BP0CG30 244 aa5□□□□□ -1.61
CD44-221ENST00000526000 EDN2P20800 178 aa5□□□□□ -1.61
CD44-221ENST00000526000 ZBTB25P24278 435 aa5□□□□□ -1.61
CD44-221ENST00000526000 AP3S2P59780 193 aa5□□□□□ -1.61
CD44-221ENST00000526000 IL18Q14116 193 aa5□□□□□ -1.61
CD44-221ENST00000526000 GUCA2BQ16661 112 aa5□□□□□ -1.61
CD44-221ENST00000526000 AKIRIN2Q53H80 203 aa5□□□□□ -1.61
CD44-221ENST00000526000 ZNF562Q6V9R5 426 aa5□□□□□ -1.61
CD44-221ENST00000526000 GTSCR1Q86UQ5 136 aa5□□□□□ -1.61
CD44-221ENST00000526000 ZNF383Q8NA42 475 aa5□□□□□ -1.61
CD44-221ENST00000526000 POC5Q8NA72 575 aa5□□□□□ -1.61
CD44-221ENST00000526000 BEST4Q8NFU0 473 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms