RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 C1orf100Q5SVJ3 147 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 DCST2Q5T1A1 773 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 FAM166AQ6J272 317 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 KCTD18Q6PI47 426 aaPredicted RBP4.24□□□□□ -1.73
CD44-218ENST00000525469 Q6ZRM9 215 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 ANKRD37Q7Z713 158 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 PIANPQ8IYJ0 282 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 FAM58AQ8N1B3 248 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 RAB42Q8N4Z0 105 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 C2orf73Q8N5S3 287 aaPredicted RBP4.24□□□□□ -1.73
CD44-218ENST00000525469 C3orf56Q8N813 242 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 CYB561D1Q8N8Q1 229 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 NECAP1Q8NC96 275 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 STXBP6Q8NFX7 210 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 OR10P1Q8NGE3 313 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 OR4P4Q8NGL7 312 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 OR13C9Q8NGT0 318 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 OR5H2Q8NGV7 314 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 OR2G3Q8NGZ4 309 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 CLDND2Q8NHS1 167 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 TMEM239Q8WW34 195 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 NEU4Q8WWR8 484 aaPredicted RBP4.24□□□□□ -1.73
CD44-218ENST00000525469 RERGQ96A58 199 aaPredicted RBP4.24□□□□□ -1.73
CD44-218ENST00000525469 MRGPRFQ96AM1 343 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 BORCS7Q96B45 105 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 WDYHV1Q96HA8 205 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 RBM24Q9BX46 236 aaKnown RBP4.24□□□□□ -1.73
CD44-218ENST00000525469 SPANXDQ9BXN6 97 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 VN1R1Q9GZP7 353 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 ZDHHC11Q9H8X9 412 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 KCNIP1Q9NZI2 227 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 PRSS50Q9UI38 385 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 TRAPPC2LQ9UL33 140 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 ANAPC10Q9UM13 185 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 B3GALT5Q9Y2C3 310 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 TRAPPC1Q9Y5R8 145 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 ALPK2Q86TB3 2170 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 NCKAP5O14513 1909 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 ANK2Q01484 3957 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 IGLV3-16A0A075B6K0 115 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 TRGV5A0A0B4J1U4 118 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 A0A1W2PNV4 684 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 IGLC7A0M8Q6 106 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 GAGE10A6NGK3 116 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 MSGN1A6NI15 193 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 DIRC3C9JPN6 131 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 H0YIZ8 118 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 SLC33A1O00400 549 aaPredicted RBP4.23□□□□□ -1.73
CD44-218ENST00000525469 CCL22O00626 93 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 PIN1P1O15428 100 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 YPEL1O60688 119 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 RAD51DO75771 328 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 IGHG3P01860 377 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 CTSDP07339 412 aaPredicted RBP4.23□□□□□ -1.73
CD44-218ENST00000525469 NGFRP08138 427 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 ZNF708P17019 499 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 ATP6V0CP27449 155 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 PEBP1P30086 187 aaKnown RBP4.23□□□□□ -1.73
CD44-218ENST00000525469 OPRM1P35372 400 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 TIMP3P35625 211 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 CTRLP40313 264 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 MDH2P40926 338 aaKnown RBP4.23□□□□□ -1.73
CD44-218ENST00000525469 PSMB3P49720 205 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 MLF1P58340 268 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 RHOBP62745 196 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 CSNK2A1P68400 391 aaPredicted RBP4.23□□□□□ -1.73
CD44-218ENST00000525469 BTG2P78543 158 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 MMDQ15546 238 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 SPIN3Q5JUX0 258 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 ZNF343Q6P1L6 599 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 AGTRAPQ6RW13 159 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 DOK3Q7L591 496 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 MRPL21Q7Z2W9 205 aaKnown RBP4.23□□□□□ -1.73
CD44-218ENST00000525469 TRAPPC6BQ86SZ2 158 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 CMTM1Q8IZ96 169 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 MUC15Q8N387 334 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 DEFB125Q8N687 156 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 ZNF709Q8N972 641 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 CSNK2A3Q8NEV1 391 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 OR52M1Q8NGK5 317 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 OR6N2Q8NGY6 317 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 PLPPR1Q8TBJ4 325 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 RNF133Q8WVZ7 376 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 MBD3L1Q8WWY6 194 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 YPEL2Q96QA6 119 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 GPA33Q99795 319 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 DEFB126Q9BYW3 111 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 PARLQ9H300 379 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 METTL7AQ9H8H3 244 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 ST20Q9HBF5 79 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 MCTS1Q9ULC4 181 aaKnown RBP4.23□□□□□ -1.73
CD44-218ENST00000525469 HSF4Q9ULV5 492 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 DHDHQ9UQ10 334 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 PAM16Q9Y3D7 125 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 RHBDD3Q9Y3P4 386 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 PXMP4Q9Y6I8 212 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 MGAM2Q2M2H8 2515 aa4.23□□□□□ -1.73
CD44-218ENST00000525469 CPSF4LA6NMK7 179 aaKnown RBP4.22□□□□□ -1.73
CD44-218ENST00000525469 H0YGG7 62 aa4.22□□□□□ -1.73
CD44-218ENST00000525469 M0QYG6 137 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms