RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 IGKV6D-41A0A0C4DH26 115 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 A8MT66 165 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 G3V2T6 193 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 TSTD3H0UI37 97 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 H3BMM0 161 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.03□□□□□ -1.92
USP47-206ENST00000525367 LST1O00453 97 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 UBE2L6O14933 153 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 PFDN1O60925 122 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 MUC1P15941 1255 aaPredicted RBP3.03□□□□□ -1.92
USP47-206ENST00000525367 CRABP1P29762 137 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 GABRA4P48169 554 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 DEFA1P59665 94 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 TBPL1P62380 186 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 ZNF616Q08AN1 781 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 CST6Q15828 149 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 TNFAIP8L3Q5GJ75 292 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 C10orf91Q5T1B1 145 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 C9orf64Q5T6V5 341 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 SLC25A34Q6PIV7 304 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 Q6ZS49 121 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 PHF13Q86YI8 300 aaPredicted RBP3.03□□□□□ -1.92
USP47-206ENST00000525367 ZNF664Q8N3J9 261 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 ZFAND2AQ8N6M9 145 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 ST20-AS1Q8NBB2 130 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 ZNF439Q8NDP4 499 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 SGMS2Q8NHU3 365 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 ZNF721Q8TF20 911 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 UBE2WQ96B02 151 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 TMEM70Q9BUB7 260 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 MIXL1Q9H2W2 232 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 PARVBQ9HBI1 364 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 SNX12Q9UMY4 172 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 PBRM1Q86U86 1689 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 MYO5BQ9ULV0 1848 aa3.03□□□□□ -1.93
USP47-206ENST00000525367 CDC42BPBQ9Y5S2 1711 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 THSD7AQ9UPZ6 1657 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 TRBV20OR9-2A0A075B6H5 130 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 A0A0B4J2C4 111 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 TRAPPC13A5PLN9 417 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 A8MUN3 132 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 C9JCJ5 164 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 GPR31O00270 319 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 SLC17A3O00476 420 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 RBP1P09455 135 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 PPIBP23284 216 aaKnown RBP3.02□□□□□ -1.93
USP47-206ENST00000525367 PHBP35232 272 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 FKBP1AP62942 108 aaKnown RBP3.02□□□□□ -1.93
USP47-206ENST00000525367 C12orf74Q32Q52 190 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 MRPL51Q4U2R6 128 aaKnown RBP3.02□□□□□ -1.93
USP47-206ENST00000525367 LINC00483Q53H64 154 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 IBA57Q5T440 356 aaKnown RBP3.02□□□□□ -1.93
USP47-206ENST00000525367 Q6ZQT7 251 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 GPHB5Q86YW7 130 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 H1FOOQ8IZA3 346 aaPredicted RBP3.02□□□□□ -1.93
USP47-206ENST00000525367 RPRMLQ8N4K4 120 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 WDR61Q9GZS3 305 aaKnown RBP3.02□□□□□ -1.93
USP47-206ENST00000525367 ABCG5Q9H222 651 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 LYRM2Q9NU23 88 aaPredicted RBP3.02□□□□□ -1.93
USP47-206ENST00000525367 NDUFAF1Q9Y375 327 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 LINC00588Q9Y4M8 146 aa3.02□□□□□ -1.93
USP47-206ENST00000525367 RPRD2Q5VT52 1461 aaKnown RBP3.02□□□□□ -1.93
USP47-206ENST00000525367 A0A1W2PQ67 120 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 FUOMA2VDF0 154 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 ZNF98A6NK75 572 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 AIPO00170 330 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 NDUFC2O95298 119 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 SRP19P09132 144 aaKnown RBP3.01□□□□□ -1.93
USP47-206ENST00000525367 IGHV3-30-3P0DP02 117 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 NPPCP23582 126 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 S100A12P80511 92 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 LDLRAD2Q5SZI1 272 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 ZNF880Q6PDB4 577 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 WDR59Q6PJI9 974 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 DAND5Q8N907 189 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 C12orf29Q8N999 325 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 OR13C8Q8NGS7 320 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 MRPL30Q8TCC3 161 aaKnown RBP3.01□□□□□ -1.93
USP47-206ENST00000525367 CD200R1Q8TD46 325 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 KLF14Q8TD94 323 aaPredicted RBP3.01□□□□□ -1.93
USP47-206ENST00000525367 GPR119Q8TDV5 335 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 LMX1AQ8TE12 382 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 GPR146Q96CH1 333 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 MGLLQ99685 303 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 SEC22CQ9BRL7 303 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 PBDC1Q9BVG4 233 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 MND1Q9BWT6 205 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 SH3BGRL3Q9H299 93 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 FBXL12Q9NXK8 326 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 OR5V1Q9UGF6 321 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 PRNDQ9UKY0 176 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 SSR3Q9UNL2 185 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 U3KQK5 164 aa3.01□□□□□ -1.93
USP47-206ENST00000525367 SYNMO15061 1565 aa3□□□□□ -1.93
USP47-206ENST00000525367 A0A0J9YY10 115 aa3□□□□□ -1.93
USP47-206ENST00000525367 A0A1B0GX78 115 aa3□□□□□ -1.93
USP47-206ENST00000525367 DHRS12A0PJE2 317 aa3□□□□□ -1.93
USP47-206ENST00000525367 A8MWP6 167 aa3□□□□□ -1.93
USP47-206ENST00000525367 H7C1C5 153 aa3□□□□□ -1.93
USP47-206ENST00000525367 PLA2G10O15496 165 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms