RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 A0A1B0GX78 115 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 SLC17A3O00476 420 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 KPNA4O00629 521 aaPredicted RBP3.65□□□□□ -1.83
USP47-204ENST00000525078 ZNF682O95780 498 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 ZNF705DP0CH99 300 aaPredicted RBP3.65□□□□□ -1.83
USP47-204ENST00000525078 INAFM2P0DMQ5 153 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 PTHLHP12272 177 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 ZNF32P17041 273 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 ATP6V0CP27449 155 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 TAF6P49848 677 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 GTF2A1P52655 376 aaPredicted RBP3.65□□□□□ -1.83
USP47-204ENST00000525078 SCXQ7RTU7 201 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 GTSCR1Q86UQ5 136 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 ZNF101Q8IZC7 436 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 C11orf42Q8N5U0 333 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 ZNF615Q8N8J6 731 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 MAPK1IP1LQ8NDC0 245 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 OR11G2Q8NGC1 345 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 OR4K13Q8NH42 304 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 SLC25A40Q8TBP6 338 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 LMX1AQ8TE12 382 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 MBD3L1Q8WWY6 194 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 L3HYPDHQ96EM0 354 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 RMND5BQ96G75 393 aaPredicted RBP3.65□□□□□ -1.83
USP47-204ENST00000525078 DNAJC30Q96LL9 226 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 EFCAB11Q9BUY7 163 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 WDR61Q9GZS3 305 aaKnown RBP3.65□□□□□ -1.83
USP47-204ENST00000525078 FBXL12Q9NXK8 326 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 PHLDA3Q9Y5J5 127 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 GTF3C1Q12789 2109 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 CCDC18Q5T9S5 1454 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 YLPM1P49750 1951 aaKnown RBP3.65□□□□□ -1.83
USP47-204ENST00000525078 EFCAB5A4FU69 1503 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 ZMYM4Q5VZL5 1548 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 KDM5BQ9UGL1 1544 aa3.65□□□□□ -1.83
USP47-204ENST00000525078 NUP160Q12769 1436 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 TCF20Q9UGU0 1960 aaKnown RBP3.64□□□□□ -1.83
USP47-204ENST00000525078 A0A096LNJ9 63 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 A0A1W2PRE2 83 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 A8MUN3 132 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 CLDN25C9JDP6 229 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 BANF1O75531 89 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 PDYNP01213 254 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 LGALS1P09382 135 aaKnown RBP3.64□□□□□ -1.83
USP47-204ENST00000525078 SERPINB10P48595 397 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 EMP1P54849 157 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 TAS2R45P59539 299 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 PSPHP78330 225 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 ENDOGQ14249 297 aaKnown RBP3.64□□□□□ -1.83
USP47-204ENST00000525078 MRGPRG-AS1Q2M3A8 158 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 DEFB116Q30KQ4 102 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 RNF212Q495C1 297 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 FAM104BQ5XKR9 115 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 TOMM20LQ6UXN7 152 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 UNQ9165/PRO28630Q6UXU0 137 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 CYB561D1Q8N8Q1 229 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 OR13C8Q8NGS7 320 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 PHYHIPLQ96FC7 376 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 ERMAPQ96PL5 475 aaPredicted RBP3.64□□□□□ -1.83
USP47-204ENST00000525078 SERPINI1Q99574 410 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 CCDC32Q9BV29 185 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 GFRA4Q9GZZ7 299 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 C11orf68Q9H3H3 251 aaKnown RBP3.64□□□□□ -1.83
USP47-204ENST00000525078 FAM60AQ9NP50 221 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 MED11Q9P086 117 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 OR52A1Q9UKL2 312 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 CELA1Q9UNI1 258 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 LOXHD1Q8IVV2 1947 aa3.64□□□□□ -1.83
USP47-204ENST00000525078 TNS2Q63HR2 1409 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 LRRC9Q6ZRR7 1453 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 FYCO1Q9BQS8 1478 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 TRAV9-1A0A075B6T8 112 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 A6NED7 52 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 ARL5CA6NH57 179 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 IFNA7P01567 189 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 IGHV1-46P01743 117 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 PSMD8P48556 350 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 ZNF140P52738 457 aaPredicted RBP3.63□□□□□ -1.83
USP47-204ENST00000525078 AKR1C2P52895 323 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 HBA1P69905 142 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 TNFAIP8L3Q5GJ75 292 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 PRSS54Q6PEW0 395 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 WDR59Q6PJI9 974 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 C9orf106Q8NAJ2 232 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 OR5J2Q8NH18 312 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 SGMS2Q8NHU3 365 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 MRPL30Q8TCC3 161 aaKnown RBP3.63□□□□□ -1.83
USP47-204ENST00000525078 MALSU1Q96EH3 234 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 LYSMD1Q96S90 227 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 B9D2Q9BPU9 175 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 CHST6Q9GZX3 395 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 LRTM1Q9HBL6 345 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 CYSLTR1Q9Y271 337 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 CUX1P39880 1505 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 VIRMAQ69YN4 1812 aaKnown RBP3.63□□□□□ -1.83
USP47-204ENST00000525078 TONSLQ96HA7 1378 aa3.63□□□□□ -1.83
USP47-204ENST00000525078 SMG6Q86US8 1419 aaKnown RBP3.62□□□□□ -1.83
USP47-204ENST00000525078 UACAQ9BZF9 1416 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 CNTLNQ9NXG0 1405 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 ARHGAP35Q9NRY4 1499 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms