RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 C3orf85A0A1B0GTC6 90 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 A0A1W2PN81 502 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 HMX3A6NHT5 357 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 E7EUB6 86 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 MPPED1O15442 326 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 PLA2G10O15496 165 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 FGF16O43320 207 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 SLC22A5O76082 557 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 TPPPO94811 219 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 NXPH3O95157 252 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 CNIH1O95406 144 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 IGKV1-39P01597 117 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 IGHG2P01859 326 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 PRH1P02810 166 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 IGKV1D-39P04432 117 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 REG1AP05451 166 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 CRYGBP07316 175 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 TBPP20226 339 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 F2RP25116 425 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 CD40LGP29965 261 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 CHRNA7P36544 502 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 RAB25P57735 213 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 OR2B8PP59922 312 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 SSBP2P81877 361 aaPredicted RBP3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 IFITM3Q01628 133 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF45Q02386 682 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 CATR1Q13166 79 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 FXYD3Q14802 87 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 MEF2DQ14814 521 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 VMA21Q3ZAQ7 101 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 TMEM177Q53S58 311 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 SPINK9Q5DT21 86 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 TCTEX1D4Q5JR98 221 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 C11orf87Q6NUJ2 197 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF66Q6ZN08 573 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 C16orf82Q7Z2V1 217 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 PPP1R27Q86WC6 154 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 CMTM1Q8IZ96 169 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 SLC38A6Q8IZM9 456 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 Q8N2B8 174 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 STPG2Q8N412 459 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 GDPD1Q8N9F7 314 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 LFNGQ8NES3 379 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 DMBX1Q8NFW5 382 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 OR5T1Q8NG75 326 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 OR4S2Q8NH73 311 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 SPATA3Q8NHX4 192 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 TMEM230Q96A57 120 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 R3HDM4Q96D70 268 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 ADTRPQ96IZ2 230 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 OR5B12Q96R08 314 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 TSNAXQ99598 290 aaKnown RBP3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 CITED2Q99967 270 aaPredicted RBP3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 KLK15Q9H2R5 256 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 OR51J1Q9H342 316 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 GHITMQ9H3K2 345 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 C5orf66Q9H5L9 145 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF430Q9H8G1 570 aaPredicted RBP3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 LIN7CQ9NUP9 197 aaKnown RBP3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 COPZ2Q9P299 210 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 GPR132Q9UNW8 380 aa3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 C14orf166Q9Y224 244 aaKnown RBP3.62□□□□□ -1.83
CHMP4A-202ENST00000524955 TRAV41A0A0B4J266 112 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 A0A1B0GW64 132 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 TCRBV4S1A1TA0A5B7 111 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 PSMB11A5LHX3 300 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 MSGN1A6NI15 193 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 DBX1A6NMT0 343 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 M0QZK8 103 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 SOX15O60248 233 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 FBXO24O75426 580 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 TSPAN15O95858 294 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 HLA-DRB1P01911 266 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 RPLP1P05386 114 aaKnown RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 CTSDP07339 412 aaPredicted RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 OR5AC1P0C628 307 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 OR9G9P0C7N8 305 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 RRASP10301 218 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 PF4V1P10720 104 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 ANXA7P20073 488 aaKnown RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 VDAC1P21796 283 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 VAMP1P23763 118 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 PTBP1P26599 531 aaKnown RBP eCLIP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 BTCP35070 178 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 FAUP35544 74 aaKnown RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 LGALS7P47929 136 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 COMPP49747 757 aaPredicted RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 UCP3P55916 312 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 AP3S2P59780 193 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 UBE2MP61081 183 aaKnown RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 UBE2KP61086 200 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 RPL15P61313 204 aaKnown RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 SSBP1Q04837 148 aaKnown RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF846Q147U1 533 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 PRSS8Q16651 343 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 TRIM16LQ309B1 348 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 DEFB136Q30KP8 78 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 KRTAP21-3Q3LHN1 58 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 ASPHD1Q5U4P2 390 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 OR4A47Q6IF82 309 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms