RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 LFNGQ8NES3 379 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 NPBQ8NG41 125 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 CACNG8Q8WXS5 425 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 ZNF251Q9BRH9 671 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 KAT8Q9H7Z6 458 aaKnown RBP4.67□□□□□ -1.66
NEDD8-203ENST00000524927 LINC00574Q9H8X3 128 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 GHRLQ9UBU3 117 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 U3KQV3 271 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 LPAP08519 4548 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 H3BTX0 84 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 RIPK2O43353 540 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 ANP32DO95626 131 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 CGB3P0DN86 165 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 CGB7P0DN87 165 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 IL3RAP26951 378 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 VHLP40337 213 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 CCL18P55774 89 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 CDC42P60953 191 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 GRB2P62993 217 aaKnown RBP4.66□□□□□ -1.66
NEDD8-203ENST00000524927 CYLC2Q14093 348 aaPredicted RBP4.66□□□□□ -1.66
NEDD8-203ENST00000524927 CRMP1Q14194 572 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 ZNF506Q5JVG8 444 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 LEMD1Q68G75 181 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 REG3GQ6UW15 175 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 ENTHD1Q8IYW4 607 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 CNPY4Q8N129 248 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 LINC00311Q8N616 119 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 OR10A7Q8NGE5 316 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 OR4D11Q8NGI4 311 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 ZIM3Q96PE6 472 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 OSBPL10Q9BXB5 764 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 KRTAP4-4Q9BYR3 166 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 PARP12Q9H0J9 701 aaKnown RBP4.66□□□□□ -1.66
NEDD8-203ENST00000524927 CENPMQ9NSP4 180 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 DNAH8Q96JB1 4490 aa4.66□□□□□ -1.66
NEDD8-203ENST00000524927 A0A087WTM6 91 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 TMEM213A2RRL7 107 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 ACOD1A6NK06 481 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 FOXI3A8MTJ6 420 aaPredicted RBP4.65□□□□□ -1.67
NEDD8-203ENST00000524927 KRTAP16-1A8MUX0 517 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 ZNF878C9JN71 531 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 NOL3O60936 208 aaKnown RBP4.65□□□□□ -1.67
NEDD8-203ENST00000524927 NDUFA3O95167 84 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 SEMG1P04279 462 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 IFI30P13284 250 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 IL24Q13007 206 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 DMKNQ6E0U4 476 aaPredicted RBP4.65□□□□□ -1.67
NEDD8-203ENST00000524927 MICU2Q8IYU8 434 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 C8orf31Q8N9H6 132 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 ZNF565Q8N9K5 539 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 ZNF485Q8NCK3 441 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 GPR32P1Q8NGA4 272 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 OR1L1Q8NH94 360 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 SLAMF6Q96DU3 332 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 FAM103A1Q9BTL3 118 aaKnown RBP4.65□□□□□ -1.67
NEDD8-203ENST00000524927 PKIBQ9C010 78 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 POLR2J2Q9GZM3 115 aaKnown RBP4.65□□□□□ -1.67
NEDD8-203ENST00000524927 NSRP1Q9H0G5 558 aaKnown RBP4.65□□□□□ -1.67
NEDD8-203ENST00000524927 POLR2J3Q9H1A7 115 aaKnown RBP4.65□□□□□ -1.67
NEDD8-203ENST00000524927 DCAF13Q9NV06 445 aaKnown RBP4.65□□□□□ -1.67
NEDD8-203ENST00000524927 ZNF446Q9NWS9 450 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 MRPL22Q9NWU5 206 aaKnown RBP4.65□□□□□ -1.67
NEDD8-203ENST00000524927 IDI2-AS1Q9NZ38 188 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 DCDC2Q9UHG0 476 aa4.65□□□□□ -1.67
NEDD8-203ENST00000524927 A0A0U1RQV5 110 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 A0A1W2PPE3 182 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 MFSD2BA6NFX1 497 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 A8MWP6 167 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 EFCAB9A8MZ26 197 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 CSN2P05814 226 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 HTR1FP30939 366 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 CMC4P56277 68 aaPredicted RBP4.64□□□□□ -1.67
NEDD8-203ENST00000524927 AESQ08117 197 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 EXOSC2Q13868 293 aaKnown RBP4.64□□□□□ -1.67
NEDD8-203ENST00000524927 TMEM41BQ5BJD5 291 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 PLCXD3Q63HM9 321 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 ZNF562Q6V9R5 426 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 DCXRQ7Z4W1 244 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 CSNK1G2-AS1Q8NCQ2 148 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 ACMSDQ8TDX5 336 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 MARC2Q969Z3 335 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 CEP19Q96LK0 163 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 CALYQ9NYX4 217 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 MBD2Q9UBB5 411 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 RNF24Q9Y225 148 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 LINC00588Q9Y4M8 146 aa4.64□□□□□ -1.67
NEDD8-203ENST00000524927 A0A1B0GU03 582 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 PQLC2LA1A4F0 135 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 OR4C46A6NHA9 309 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 SNRPCP09234 159 aaKnown RBP4.63□□□□□ -1.67
NEDD8-203ENST00000524927 CALCBP10092 127 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 HSD11B1P28845 292 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 ZNF137PP52743 207 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 ATP1B3P54709 279 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 ZNF121P58317 390 aaPredicted RBP4.63□□□□□ -1.67
NEDD8-203ENST00000524927 LINC00315P59091 139 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 TAS2R41P59536 307 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 CAV1Q03135 178 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 CCDC153Q494R4 210 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms