RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 SLC25A17O43808 307 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 SCGNO76038 276 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 IGLV2-23P01705 113 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 CHRNA7P36544 502 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 GNB1P62873 340 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 ASPHD1Q5U4P2 390 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 UNQ5815/PRO19632Q6UWF5 114 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 TCTEX1D1Q8N7M0 179 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 BVESQ8NE79 360 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 OR11H1Q8NG94 326 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 NUDCD2Q8WVJ2 157 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 ETV7Q9Y603 341 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 ARPC1BO15143 372 aaKnown RBP8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 AIREO43918 545 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 SSX5O60225 188 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 CRYGBP07316 175 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 SCAND1P57086 179 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 PITPNAQ00169 270 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 TAGLNQ01995 201 aaKnown RBP8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 TMEM267Q0VDI3 215 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 TMEM177Q53S58 311 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 IDNKQ5T6J7 187 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 C9orf66Q5T8R8 295 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 ZNF562Q6V9R5 426 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 ZNF600Q6ZNG1 722 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 OR1N2Q8NGR9 330 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 SLC25A38Q96DW6 304 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 OR5B12Q96R08 314 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 FAM103A1Q9BTL3 118 aaKnown RBP8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 ST6GALNAC5Q9BVH7 336 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 DIABLOQ9NR28 239 aa8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 RBM7Q9Y580 266 aaKnown RBP8.67□□□□□ -1.02
TRAPPC4-204ENST00000524797 TRAPPC2P0DI81 140 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 TRAPPC2BP0DI82 140 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 LUMP51884 338 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 DGCR2P98153 550 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 AKIRIN2Q53H80 203 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 CASTOR1Q8WTX7 329 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 DDB2Q92466 427 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 ARPC1AQ92747 370 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 ADTRPQ96IZ2 230 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 CCDC32Q9BV29 185 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 NXF2Q9GZY0 626 aaKnown RBP8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 CCDC59Q9P031 241 aaKnown RBP8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 SEC14L6B5MCN3 397 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 CTXN2P0C2S0 81 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 OR8U8P0C7N1 319 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 RRASP10301 218 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 DUTP33316 252 aaKnown RBP8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 LGALS7P47929 136 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 SSBP2P81877 361 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 ZNF616Q08AN1 781 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 FXYD3Q14802 87 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 RTL8BQ17RB0 113 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 ACTBL2Q562R1 376 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 SPANXN2Q5MJ10 180 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 FAM122CQ6P4D5 195 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 CNIH2Q6PI25 160 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 SLC38A6Q8IZM9 456 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 LFNGQ8NES3 379 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 HARBI1Q96MB7 349 aa8.66□□□□□ -1.02
TRAPPC4-204ENST00000524797 TRAV18A0A075B6X5 111 aa8.65□□□□□ -1.02
TRAPPC4-204ENST00000524797 SHOXO15266 292 aa8.65□□□□□ -1.02
TRAPPC4-204ENST00000524797 HLA-DQB1P01920 261 aa8.65□□□□□ -1.02
TRAPPC4-204ENST00000524797 LGALS1P09382 135 aaKnown RBP8.65□□□□□ -1.02
TRAPPC4-204ENST00000524797 NFYAP23511 347 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC4-204ENST00000524797 PJVKQ0ZLH3 352 aa8.65□□□□□ -1.02
TRAPPC4-204ENST00000524797 PYHIN1Q6K0P9 492 aa8.65□□□□□ -1.02
TRAPPC4-204ENST00000524797 CCDC28AQ8IWP9 274 aa8.65□□□□□ -1.02
TRAPPC4-204ENST00000524797 ALX4Q9H161 411 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC4-204ENST00000524797 OR2W1Q9Y3N9 320 aa8.65□□□□□ -1.02
TRAPPC4-204ENST00000524797 A0A0A6YYH2 397 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 HMX3A6NHT5 357 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 A6NJ64 397 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 SRRM4A7MD48 611 aaKnown RBP8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 LINC00473A8K010 186 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 TGFBR1P36897 503 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 ETV6P41212 452 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 MRGPRG-AS1Q2M3A8 158 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 DEFB121Q5J5C9 76 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 ZNF645Q8N7E2 425 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 ST6GAL2Q96JF0 529 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 RHOVQ96L33 236 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 MS4A10Q96PG2 267 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 ANXA10Q9UJ72 324 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 IGHV4OR15-8A0A075B7B6 117 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 A0A087WW49 117 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 IGKV1D-13A0A0B4J2D9 117 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 TMEM127O75204 238 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 CNIH1O95406 144 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 IGKV1-13P0DP09 117 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 TPPP2P59282 170 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 TIMM50Q3ZCQ8 353 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 TEX45Q8NA69 505 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 DCUN1D4Q92564 292 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 SPATA2Q9UM82 520 aa8.64□□□□□ -1.03
TRAPPC4-204ENST00000524797 TNCP24821 2201 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 LINC01619G3V211 115 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 RAMP3O60896 148 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 TUSC2O75896 110 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms