RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 MSGN1A6NI15 193 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 LEUTXA8MZ59 168 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 UMAD1C9J7I0 102 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 KRBOX1C9JBD0 128 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 FAM157AC9JC47 383 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 TRIM77I1YAP6 450 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 WRBO00258 174 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 TMPRSS2O15393 492 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 NDUFB3O43676 98 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 SYNGR2O43760 224 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 SOX15O60248 233 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 CRLF1O75462 422 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 DFFBO76075 338 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 CYB5R3P00387 301 aaPredicted RBP5.79□□□□□ -1.48
VPS11-201ENST00000524454 IGKV1-39P01597 117 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 IGKV1-5P01602 117 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 IGKV1D-39P04432 117 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 SULT1A1P50225 295 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 ATP5IP56385 69 aaPredicted RBP5.79□□□□□ -1.48
VPS11-201ENST00000524454 TMEM33P57088 247 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 RPL31P62899 125 aaKnown RBP5.79□□□□□ -1.48
VPS11-201ENST00000524454 VAMP2P63027 116 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 ALKAL2Q6UX46 152 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 TCF23Q7RTU1 214 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 ZNF429Q86V71 674 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 SPAG16Q8N0X2 631 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 FGFRL1Q8N441 504 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 COMMD1Q8N668 190 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 OR52L2PQ8NGH6 319 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 OR4S2Q8NH73 311 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 CLDND2Q8NHS1 167 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 RNASE11Q8TAA1 199 aaKnown RBP5.79□□□□□ -1.48
VPS11-201ENST00000524454 TCTEX1D2Q8WW35 142 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 DDB2Q92466 427 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 GPR146Q96CH1 333 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 GNPNAT1Q96EK6 184 aaPredicted RBP5.79□□□□□ -1.48
VPS11-201ENST00000524454 ZNF714Q96N38 554 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 S1PR3Q99500 378 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 CCL13Q99616 98 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 GINS3Q9BRX5 216 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 PARP12Q9H0J9 701 aaKnown RBP5.79□□□□□ -1.48
VPS11-201ENST00000524454 ZC4H2Q9NQZ6 224 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.79□□□□□ -1.48
VPS11-201ENST00000524454 FBXL17Q9UF56 701 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 LSM5Q9Y4Y9 91 aaKnown RBP5.79□□□□□ -1.48
VPS11-201ENST00000524454 MTORP42345 2549 aa5.79□□□□□ -1.48
VPS11-201ENST00000524454 NSD1Q96L73 2696 aaPredicted RBP5.79□□□□□ -1.48
VPS11-201ENST00000524454 ABCA1O95477 2261 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 IGHV3OR15-7A0A075B7D8 119 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 TRAV39A0A0B4J263 110 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 ANKRD34BA5PLL1 514 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 MFSD2BA6NFX1 497 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 MARCH11A6NNE9 402 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 A8MXK9 166 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 TEX46H3BTG2 121 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 TNFSF12O43508 249 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 SCGB1D2O95969 90 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 TGFAP01135 160 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 IGHV2-70P01814 119 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 GYPAP02724 150 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 OR8U8P0C7N1 319 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 SPP1P10451 314 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 NQO2P16083 231 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 SULT1A2P50226 295 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 HBG1P69891 147 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 HBG2P69892 147 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 BLOC1S1P78537 153 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 HOXA4Q00056 320 aaPredicted RBP5.78□□□□□ -1.48
VPS11-201ENST00000524454 SRSF2Q01130 221 aaKnown RBP5.78□□□□□ -1.48
VPS11-201ENST00000524454 EWSR1Q01844 656 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS11-201ENST00000524454 TNFRSF9Q07011 255 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 CDPF1Q6NVV7 123 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 DPPA3Q6W0C5 159 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 IL34Q6ZMJ4 242 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 FAM216BQ8N7L0 139 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 BOLLQ8N9W6 283 aaKnown RBP5.78□□□□□ -1.48
VPS11-201ENST00000524454 CCL17Q92583 94 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 TIMD4Q96H15 378 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 PCGF1Q9BSM1 259 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 C7orf69Q9H7B7 122 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 CACNG5Q9UF02 275 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 MIOXQ9UGB7 285 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 RNF150Q9ULK6 438 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 PSG11Q9UQ72 335 aa5.78□□□□□ -1.48
VPS11-201ENST00000524454 STRAPQ9Y3F4 350 aaKnown RBP5.78□□□□□ -1.48
VPS11-201ENST00000524454 CSPG4Q6UVK1 2322 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 TLN2Q9Y4G6 2542 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 hCG_1809904A0A1W2PP81 198 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 A0A1W2PPE2 198 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 A0A1W2PR64 198 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 A0A1W2PRV1 198 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 C17orf98A8MV24 154 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 TXNL1O43396 289 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 SSSCA1O60232 199 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 HRASP01112 189 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 ZP3P21754 424 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 IL3RAP26951 378 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 LPAR6P43657 344 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 CAV2P51636 162 aa5.77□□□□□ -1.49
VPS11-201ENST00000524454 F2RL1P55085 397 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms