RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 DERL1Q9BUN8 251 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 COPS7AQ9UBW8 275 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 CD207Q9UJ71 328 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 ESPL1Q14674 2120 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 TRGV10A0A0A0MS01 117 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 SMIM27A0A1W2PRY6 76 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 GJE1A6NN92 205 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 H0Y8X5 98 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 SAP30O75446 220 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 MGST1P10620 155 aaKnown RBP7.04□□□□□ -1.28
CSMD1-213ENST00000523488 ATP5G3P48201 142 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 KRTCAP3Q53RY4 240 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 LHFPL2Q6ZUX7 228 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 VASH2Q86V25 355 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 PATE1Q8WXA2 126 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 SERTAD4Q9NUC0 356 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 C5orf63A6NC05 138 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 M0R2Z0 102 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 HSPB6O14558 160 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 TNFSF11O14788 317 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 HNRNPA1P09651 372 aaKnown RBP eCLIP7.04□□□□□ -1.28
CSMD1-213ENST00000523488 FUT6P51993 359 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 PRSS12P56730 875 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 RBM11P57052 281 aaKnown RBP7.04□□□□□ -1.28
CSMD1-213ENST00000523488 CX3CL1P78423 397 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 PAX2Q02962 417 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 HLA-BQ31612 363 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 TMEM240Q5SV17 173 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 NPFFR1Q9GZQ6 430 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 PEF1Q9UBV8 284 aaKnown RBP7.04□□□□□ -1.28
CSMD1-213ENST00000523488 KCNS2Q9ULS6 477 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 DIDO1Q9BTC0 2240 aaKnown RBP7.04□□□□□ -1.28
CSMD1-213ENST00000523488 OVOL3O00110 214 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 GOSR1O95249 250 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 CA2P00918 260 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 PSG2P11465 335 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 F2RP25116 425 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 PTGDSP41222 190 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 SLC35B1P78383 322 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 MYBPHQ13203 477 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 RAB30Q15771 203 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 C1orf53Q5VUE5 145 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 RHBDD2Q6NTF9 364 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 MMD2Q8IY49 270 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 GJC3Q8NFK1 279 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 NINJ1Q92982 152 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 SPTSSAQ969W0 71 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 CHRDL1Q9BU40 450 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 ST20Q9HBF5 79 aa7.04□□□□□ -1.28
CSMD1-213ENST00000523488 PPIAL4EA0A075B759 164 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 PPIAL4CA0A0B4J2A2 164 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 PPIAL4DF5H284 164 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 M0R135 149 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 PGLYRP1O75594 196 aaPredicted RBP7.03□□□□□ -1.28
CSMD1-213ENST00000523488 VAMP5O95183 116 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 PPIAL4FP0DN26 164 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 NPY1RP25929 384 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 FABP6P51161 128 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 ZNF83P51522 516 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 Q6ZRM9 215 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 C17orf82Q86X59 251 aaPredicted RBP7.03□□□□□ -1.28
CSMD1-213ENST00000523488 ZNF501Q96CX3 271 aaPredicted RBP7.03□□□□□ -1.28
CSMD1-213ENST00000523488 ZNF799Q96GE5 643 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 CLCF1Q9UBD9 225 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 SELENOKQ9Y6D0 94 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 ARHGEF17Q96PE2 2063 aaPredicted RBP7.03□□□□□ -1.28
CSMD1-213ENST00000523488 C5orf42Q9H799 3197 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 KIR2DS1A0A191URI9 304 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 FAM90A9PA6NNJ1 464 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 K7EN84 100 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 LINC01565O15544 149 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 EFNA2O43921 213 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 IGKV1-5P01602 117 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 FKBP2P26885 142 aaKnown RBP7.03□□□□□ -1.28
CSMD1-213ENST00000523488 KIR2DS4P43632 304 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 TCL1AP56279 114 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 PSG9Q00887 426 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 RBPJQ06330 500 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 SCGB2A2Q13296 93 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 KIR2DS1Q14954 304 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 RSPO4Q2I0M5 234 aaPredicted RBP7.03□□□□□ -1.28
CSMD1-213ENST00000523488 PLCXD3Q63HM9 321 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 ZNF776Q68DI1 518 aaPredicted RBP7.03□□□□□ -1.28
CSMD1-213ENST00000523488 COLCA1Q6ZS62 124 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 ZDHHC23Q8IYP9 409 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 ZNF114Q8NC26 417 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 LMX1AQ8TE12 382 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 IL1F10Q8WWZ1 152 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 TMEM147Q9BVK8 224 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 CLEC7AQ9BXN2 247 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 PLSCR4Q9NRQ2 329 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 SCTP09683 121 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 CD38P28907 300 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 PPP1CAP62136 330 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 GABRA6Q16445 453 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 ZNF585BQ52M93 769 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.03□□□□□ -1.28
CSMD1-213ENST00000523488 MRPL54Q6P161 138 aaKnown RBP7.03□□□□□ -1.28
CSMD1-213ENST00000523488 SLC25A34Q6PIV7 304 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 PARM1Q6UWI2 310 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms