RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 TEX261Q6UWH6 196 aa12.52□□□□□ -0.41
CTNNA1-236ENST00000522792 RHOVQ96L33 236 aa12.52□□□□□ -0.41
CTNNA1-236ENST00000522792 QTRT1Q9BXR0 403 aaKnown RBP12.52□□□□□ -0.41
CTNNA1-236ENST00000522792 SIRPDQ9H106 197 aa12.52□□□□□ -0.41
CTNNA1-236ENST00000522792 AMMECR1Q9Y4X0 333 aaPredicted RBP12.52□□□□□ -0.41
CTNNA1-236ENST00000522792 U3KQ87 197 aa12.52□□□□□ -0.41
CTNNA1-236ENST00000522792 SPG11Q96JI7 2443 aa12.51□□□□□ -0.41
CTNNA1-236ENST00000522792 H3BP45 60 aa12.51□□□□□ -0.41
CTNNA1-236ENST00000522792 SYNGR2O43760 224 aa12.51□□□□□ -0.41
CTNNA1-236ENST00000522792 SPINK9Q5DT21 86 aa12.51□□□□□ -0.41
CTNNA1-236ENST00000522792 LDLRAD2Q5SZI1 272 aa12.51□□□□□ -0.41
CTNNA1-236ENST00000522792 OR4A47Q6IF82 309 aa12.51□□□□□ -0.41
CTNNA1-236ENST00000522792 OR11H6Q8NGC7 330 aa12.51□□□□□ -0.41
CTNNA1-236ENST00000522792 BSCL2Q96G97 398 aaPredicted RBP12.51□□□□□ -0.41
CTNNA1-236ENST00000522792 ZNF471Q9BX82 626 aaPredicted RBP12.51□□□□□ -0.41
CTNNA1-236ENST00000522792 SMIM3Q9BZL3 60 aa12.51□□□□□ -0.41
CTNNA1-236ENST00000522792 CELSR2Q9HCU4 2923 aa12.51□□□□□ -0.41
CTNNA1-236ENST00000522792 SRRM4A7MD48 611 aaKnown RBP12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 SHOXO15266 292 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 GPR137BO60478 399 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 TOX4O94842 621 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 HRASP01112 189 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 HOXB4P17483 251 aaPredicted RBP12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 DVL1P1P54792 670 aaPredicted RBP12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 PAX9P55771 341 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 TNFRSF9Q07011 255 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 DHRS7BQ6IAN0 325 aaPredicted RBP12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 C1orf122Q6ZSJ8 110 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 OR2C3Q8N628 320 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 ZNF680Q8NEM1 530 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 OR4A16Q8NH70 328 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 RPEQ96AT9 228 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 HARBI1Q96MB7 349 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 RBKSQ9H477 322 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 HSPB7Q9UBY9 170 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 IGSF23A1L1A6 192 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 RNASEK-C17orf49H0YIS7 233 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 RRASP10301 218 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 DSCR9P59020 149 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 EXOSC2Q13868 293 aaKnown RBP12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 MOB3BQ86TA1 216 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 SLC51BQ86UW2 128 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 WASHC3Q9Y3C0 194 aa12.5□□□□□ -0.41
CTNNA1-236ENST00000522792 CSMD2Q7Z408 3487 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 IGHV1-3A0A0C4DH29 117 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 ODF3BA8MYP8 253 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 LY6LH3BQJ8 138 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 GAPDHP04406 335 aaKnown RBP12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 MMP9P14780 707 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 PAX6P26367 422 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 HTR1DP28221 377 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 UBE2KP61086 200 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 RELBQ01201 579 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 EWSR1Q01844 656 aaKnown RBP eCLIP12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 NHLH2Q02577 135 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 LHFPL4Q7Z7J7 247 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 PDPNQ86YL7 162 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 LHX4Q969G2 390 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 ZDHHC16Q969W1 377 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 FLYWCH2Q96CP2 140 aaKnown RBP12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 TBX15Q96SF7 602 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 LYRM2Q9NU23 88 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 FBXL17Q9UF56 701 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 INSIG2Q9Y5U4 225 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 FAM90A26D6RGX4 464 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 TPTE2P1Q5T6R2 138 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 RAB40CQ96S21 281 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 CYTL1Q9NRR1 136 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 HILPDAQ9Y5L2 63 aa12.49□□□□□ -0.41
CTNNA1-236ENST00000522792 DOPEY2Q9Y3R5 2298 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 VPS13CQ709C8 3753 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 FAM90A9PA6NNJ1 464 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 LEUTXA8MZ59 168 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 IFNA17P01571 189 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 SAA1P0DJI8 122 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 RPS16P62249 146 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 RPL23AP62750 156 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 TMEM267Q0VDI3 215 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 DEFB113Q30KQ7 82 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 TMEM177Q53S58 311 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 GPR157Q5UAW9 335 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 ALKAL2Q6UX46 152 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 ZNF767PQ75MW2 155 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 TMEM252Q8N6L7 170 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 OSR1Q8TAX0 266 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 ST8SIA2Q92186 375 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 RITA1Q96K30 269 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 UNKLQ9H9P5 680 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 PSENENQ9NZ42 101 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 DPM3Q9P2X0 92 aa12.48□□□□□ -0.41
CTNNA1-236ENST00000522792 CEBPZOSA8MTT3 80 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 CST7O76096 145 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 MYOD1P15172 320 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 MC5RP33032 325 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 RAB13P51153 203 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 UBA52P62987 128 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 POU2AF1Q16633 256 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 OR4C13Q8NGP0 309 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 BEX4Q9NWD9 120 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 POLR3KQ9Y2Y1 108 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms