RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 EWSR1Q01844 656 aaKnown RBP eCLIP11.45□□□□□ -0.582e-6■■■■□ 21.2
TRAPPC9-213ENST00000522504 SPHARQ15513 63 aa11.45□□□□□ -0.58
TRAPPC9-213ENST00000522504 C2orf76Q3KRA6 126 aa11.45□□□□□ -0.58
TRAPPC9-213ENST00000522504 VMA21Q3ZAQ7 101 aa11.45□□□□□ -0.58
TRAPPC9-213ENST00000522504 LIPKQ5VXJ0 399 aa11.45□□□□□ -0.58
TRAPPC9-213ENST00000522504 OR10J5Q8NHC4 309 aa11.45□□□□□ -0.58
TRAPPC9-213ENST00000522504 ACOT12Q8WYK0 555 aa11.45□□□□□ -0.58
TRAPPC9-213ENST00000522504 FAM3DQ96BQ1 224 aa11.45□□□□□ -0.58
TRAPPC9-213ENST00000522504 OVOL2Q9BRP0 275 aa11.45□□□□□ -0.58
TRAPPC9-213ENST00000522504 TMEM272A0A1B0GTI8 110 aa11.44□□□□□ -0.58
TRAPPC9-213ENST00000522504 OR2J3O76001 311 aa11.44□□□□□ -0.58
TRAPPC9-213ENST00000522504 SAA1P0DJI8 122 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-213ENST00000522504 RPS25P62851 125 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-213ENST00000522504 C15orf32Q32M92 178 aa11.44□□□□□ -0.58
TRAPPC9-213ENST00000522504 TTC9CQ8N5M4 171 aa11.44□□□□□ -0.58
TRAPPC9-213ENST00000522504 NECAP1Q8NC96 275 aa11.44□□□□□ -0.58
TRAPPC9-213ENST00000522504 OR56B1Q8NGI3 324 aa11.44□□□□□ -0.58
TRAPPC9-213ENST00000522504 IGKV1D-8A0A087WSZ0 117 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 HMX3A6NHT5 357 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 PTGES3LE9PB15 166 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 DENRO43583 198 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 TUSC2O75896 110 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 LY6G6CO95867 125 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 IGHV3-23P01764 117 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 RRASP10301 218 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 CBX3Q13185 183 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 IRF3Q14653 427 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 MED22Q15528 200 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 TMEM61Q8N0U2 210 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 KCTD12Q96CX2 325 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 S4R3C0 116 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 RYR1P21817 5038 aa11.43□□□□□ -0.58
TRAPPC9-213ENST00000522504 KIAA1109Q2LD37 5005 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 A0A1B0GW64 132 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 TMEM213A2RRL7 107 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 TEX22C9J3V5 150 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 E7EUB6 86 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 GNB3P16520 340 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 CBLN1P23435 193 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 PMS2P11Q13670 270 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 H1FOOQ8IZA3 346 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 VKORC1L1Q8N0U8 176 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 RAB3CQ96E17 227 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 CCDC140Q96MF4 163 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 SPIN2AQ99865 258 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 SPIN2BQ9BPZ2 258 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 TECRQ9NZ01 308 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 MLXQ9UH92 298 aa11.42□□□□□ -0.58
TRAPPC9-213ENST00000522504 J3QRK9 145 aa11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 LGALS9O00182 355 aa11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 MFNGO00587 321 aa11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 GGCTO75223 188 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 IL6RP08887 468 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 TPBGQ13641 420 aa11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 CDK10Q15131 360 aa11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 HES5Q5TA89 166 aa11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 OSR1Q8TAX0 266 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 UFD1Q92890 307 aa11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 ADTRPQ96IZ2 230 aa11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 ST6GALNAC5Q9BVH7 336 aa11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 ELF5Q9UKW6 265 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 RBM7Q9Y580 266 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-213ENST00000522504 A0A075B6Q4 140 aa11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 SCAF4O95104 1147 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 NDUFB8O95169 186 aa11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 DIRAS3O95661 229 aa11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 CALRP27797 417 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 RPL30P62888 115 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 FABP5Q01469 135 aa11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 OR2B11Q5JQS5 317 aa11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 CLEC19AQ6UXS0 136 aa11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 GPHB5Q86YW7 130 aa11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 FANCD2OSQ96PS1 177 aa11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 GINS4Q9BRT9 223 aa11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 GGTLC1Q9BX51 225 aa11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 FBXL7Q9UJT9 491 aa11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 RAB22AQ9UL26 194 aa11.4□□□□□ -0.58
TRAPPC9-213ENST00000522504 A0A0J9YWU9 116 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 CXorf65A6NEN9 183 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 RAB27BO00194 218 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 FCGR3BO75015 233 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 ACTL6BO94805 426 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 IGLV2-14P01704 120 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 HSMCR30P0CW71 290 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 OR10A3P58181 314 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 MRPS15P82914 257 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 ZNF57Q68EA5 555 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 SLC16A13Q7RTY0 426 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 MMD2Q8IY49 270 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 UXS1Q8NBZ7 420 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 OR10R2Q8NGX6 335 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 DCUN1D5Q9BTE7 237 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 ZNF257Q9Y2Q1 563 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 V9GY05 133 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 DNAH6Q9C0G6 4158 aa11.39□□□□□ -0.59
TRAPPC9-213ENST00000522504 ZNF320A2RRD8 509 aa11.38□□□□□ -0.59
TRAPPC9-213ENST00000522504 NPIPB5A8MRT5 1133 aa11.38□□□□□ -0.59
TRAPPC9-213ENST00000522504 ARL6IP5O75915 188 aa11.38□□□□□ -0.59
TRAPPC9-213ENST00000522504 MYOD1P15172 320 aa11.38□□□□□ -0.59
TRAPPC9-213ENST00000522504 AREGP15514 252 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms