RNA–Protein interactions for RNA: ENST00000522476.5

NDRG1-222, Transcript of N-myc downstream regulated 1, human

TSL 1 (best) BASIC

Gene NDRG1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDRG1-222	ENST00000522476	SLC25A48	Q6ZT89	311 aa	Known RBP	10.9	□□□□□ -0.66
NDRG1-222	ENST00000522476	ZNF429	Q86V71	674 aa		10.9	□□□□□ -0.66
NDRG1-222	ENST00000522476	FAM216B	Q8N7L0	139 aa		10.9	□□□□□ -0.66
NDRG1-222	ENST00000522476	ZNF439	Q8NDP4	499 aa		10.9	□□□□□ -0.66
NDRG1-222	ENST00000522476	OR10P1	Q8NGE3	313 aa		10.9	□□□□□ -0.66
NDRG1-222	ENST00000522476	CCL17	Q92583	94 aa		10.9	□□□□□ -0.66
NDRG1-222	ENST00000522476	RBMXL1	Q96E39	390 aa	Known RBP	10.9	□□□□□ -0.66
NDRG1-222	ENST00000522476	ZNF714	Q96N38	554 aa		10.9	□□□□□ -0.66
NDRG1-222	ENST00000522476	UNKL	Q9H9P5	680 aa	Known RBP	10.9	□□□□□ -0.66
NDRG1-222	ENST00000522476	APC	P25054	2843 aa		10.9	□□□□□ -0.66
NDRG1-222	ENST00000522476	NIPBL	Q6KC79	2804 aa	eCLIP	10.9	□□□□□ -0.66
NDRG1-222	ENST00000522476	TNFRSF13B	O14836	293 aa	Predicted RBP	10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	NXPH3	O95157	252 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	MB	P02144	154 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	HOXB4	P17483	251 aa	Predicted RBP	10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	SNCA	P37840	140 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	ATP5I	P56385	69 aa	Predicted RBP	10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	BRWD1-AS2	P59051	145 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	GNB2	P62879	340 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	DEFA5	Q01523	94 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	SLC38A11	Q08AI6	406 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	POU2AF1	Q16633	256 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	RTL8B	Q17RB0	113 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	LRRC75B	Q2VPJ9	315 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	CT45A1	Q5HYN5	189 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	OR2B11	Q5JQS5	317 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	ODF3L1	Q8IXM7	274 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	MUC15	Q8N387	334 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	LINC00311	Q8N616	119 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	ZNF525	Q8N782	197 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	CT45A3	Q8NHU0	189 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	FAM213B	Q8TBF2	198 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	DDB2	Q92466	427 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	TMEM147	Q9BVK8	224 aa		10.9	□□□□□ -0.67
NDRG1-222	ENST00000522476	PPIH	O43447	177 aa	Known RBP	10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	H2AFB1	P0C5Y9	115 aa		10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	METTL15P1	P0C7V9	234 aa		10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	GNLY	P22749	145 aa		10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	NFYB	P25208	207 aa		10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	IL3RA	P26951	378 aa		10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	ZNF672	Q499Z4	452 aa	Predicted RBP	10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	ZNF295-AS1	Q8N0V1	137 aa		10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	LYG1	Q8N1E2	194 aa		10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	ZNF251	Q9BRH9	671 aa		10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	TMEM204	Q9BSN7	226 aa		10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	GGACT	Q9BVM4	153 aa		10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	FKBP11	Q9NYL4	201 aa		10.89	□□□□□ -0.67
NDRG1-222	ENST00000522476	SAA2-SAA4	A0A096LPE2	208 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	TRAV1-1	A0A0B4J248	108 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	C17orf112	F2Z3M2	114 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476		H3BP45	60 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	IFNA17	P01571	189 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	APOA2	P02652	100 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	SAA2	P0DJI9	122 aa	Predicted RBP	10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	SELL	P14151	372 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	AGA	P20933	346 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	ZNF134	P52741	427 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	ADORA2A-AS1	P86434	159 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	GUK1	Q16774	197 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	IZUMO4	Q1ZYL8	232 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	THNSL2	Q86YJ6	484 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	LINC01560	Q8TB33	94 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	TNFRSF14	Q92956	283 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	TMEM186	Q96B77	213 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	NKX6-2	Q9C056	277 aa	Predicted RBP	10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	WDR61	Q9GZS3	305 aa	Known RBP	10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	RAB1B	Q9H0U4	201 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	SH3BGRL3	Q9H299	93 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	PLA2G2E	Q9NZK7	142 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	KIAA1456	Q9P272	454 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	PRND	Q9UKY0	176 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	FBXO7	Q9Y3I1	522 aa		10.88	□□□□□ -0.67
NDRG1-222	ENST00000522476	PROP1	O75360	226 aa		10.87	□□□□□ -0.67
NDRG1-222	ENST00000522476	RAB11A	P62491	216 aa		10.87	□□□□□ -0.67
NDRG1-222	ENST00000522476	RPL39P5	Q59GN2	51 aa		10.87	□□□□□ -0.67
NDRG1-222	ENST00000522476	TCF23	Q7RTU1	214 aa		10.87	□□□□□ -0.67
NDRG1-222	ENST00000522476	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.87	□□□□□ -0.67
NDRG1-222	ENST00000522476	ZNF596	Q8TC21	504 aa		10.87	□□□□□ -0.67
NDRG1-222	ENST00000522476	ENY2	Q9NPA8	101 aa		10.87	□□□□□ -0.67
NDRG1-222	ENST00000522476	TMEM140	Q9NV12	185 aa		10.87	□□□□□ -0.67
NDRG1-222	ENST00000522476		A0A087X0M5	115 aa		10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476		A0A1B0GX30	115 aa		10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	MPDU1	O75352	247 aa		10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	RBP4	P02753	201 aa		10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	SFTA3	P0C7M3	94 aa		10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	TAGLN2	P37802	199 aa	Known RBP	10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	VWC2	Q2TAL6	325 aa		10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	ZNF833P	Q6ZTB9	187 aa		10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	ZNF709	Q8N972	641 aa		10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	OSR1	Q8TAX0	266 aa	Predicted RBP	10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	NEU4	Q8WWR8	484 aa	Predicted RBP	10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	TAF15	Q92804	592 aa	Known RBP eCLIP	10.86	□□□□□ -0.67	3e-6	■■■□□ 16.5
NDRG1-222	ENST00000522476	EIF5A2	Q9GZV4	153 aa	Known RBP	10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	KCNIP2	Q9NS61	270 aa		10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	FOXA2	Q9Y261	457 aa	Predicted RBP	10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	ZNF257	Q9Y2Q1	563 aa		10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.86	□□□□□ -0.67
NDRG1-222	ENST00000522476	hCG_1809904	A0A1W2PP81	198 aa		10.85	□□□□□ -0.67

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