RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 CADP27708 2225 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 TRAV1-1A0A0B4J248 108 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 LOC105371267A0A1B0GV96 52 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 M0R036 132 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 NDUFA2O43678 99 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 MMP23AO75900 390 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 IFNA10P01566 189 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 OR13C7P0DN81 318 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 GNB2P62879 340 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 HFEQ30201 348 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 UTF1Q5T230 341 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 ZNF787Q6DD87 383 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 CBLN2Q8IUK8 224 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 RARRES2Q99969 163 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 ENY2Q9NPA8 101 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 RPRMQ9NS64 109 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 CISD1Q9NZ45 108 aaKnown RBP6.93□□□□□ -1.3
HMGB4-203ENST00000519684 PTPRZ1P23471 2315 aaPredicted RBP6.93□□□□□ -1.3
HMGB4-203ENST00000519684 CACNA1DQ01668 2161 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 C17orf112F2Z3M2 114 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 MBP02144 154 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 RPS16P62249 146 aaKnown RBP6.93□□□□□ -1.3
HMGB4-203ENST00000519684 RELBQ01201 579 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 SOHLH1Q5JUK2 328 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 ZNF506Q5JVG8 444 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 HEPN1Q6WQI6 88 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 ZNF383Q8NA42 475 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 KDF1Q8NAX2 398 aaPredicted RBP6.93□□□□□ -1.3
HMGB4-203ENST00000519684 RHOVQ96L33 236 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 ZNF251Q9BRH9 671 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 AIFM2Q9BRQ8 373 aa6.93□□□□□ -1.3
HMGB4-203ENST00000519684 C15orf61A6NNL5 157 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 C15orf62A8K5M9 175 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 PMS2P5A8MQ11 134 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 DVL1O14640 695 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 IFNA1P01562 189 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 APOA2P02652 100 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 HSPB1P04792 205 aaKnown RBP6.92□□□□□ -1.3
HMGB4-203ENST00000519684 RAB11AP62491 216 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 PDLIM3Q53GG5 364 aaPredicted RBP6.92□□□□□ -1.3
HMGB4-203ENST00000519684 TMEM200BQ69YZ2 307 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 OR4A47Q6IF82 309 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 LCN15Q6UWW0 184 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 LYPD2Q6UXB3 125 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 C1orf229Q6ZS94 237 aaPredicted RBP6.92□□□□□ -1.3
HMGB4-203ENST00000519684 ZNF429Q86V71 674 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 CLDND2Q8NHS1 167 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 CA5BP1Q8WTZ4 195 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 RCC1LQ96I51 464 aaKnown RBP6.92□□□□□ -1.3
HMGB4-203ENST00000519684 VSIRQ9H7M9 311 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 RPS10P5Q9NQ39 176 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 SMCO4Q9NRQ5 59 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 SLC35D1Q9NTN3 355 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 GNG13Q9P2W3 67 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 ACACAQ13085 2346 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 PLAUP00749 431 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 ARG1P05089 322 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 CCL3L1P16619 93 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 CEBPGP53567 150 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 ICAM4Q14773 271 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 VWC2Q2TAL6 325 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 KHDC3LQ587J8 217 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 AWAT1Q58HT5 328 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 FFAR4Q5NUL3 377 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 CENPVQ7Z7K6 275 aaPredicted RBP6.92□□□□□ -1.3
HMGB4-203ENST00000519684 MUC15Q8N387 334 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 RXFP4Q8TDU9 374 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 MBD3L1Q8WWY6 194 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 ZCCHC14Q8WYQ9 949 aaKnown RBP6.92□□□□□ -1.3
HMGB4-203ENST00000519684 SLC39A9Q9NUM3 307 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 KAAG1Q9UBP8 84 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 PRNDQ9UKY0 176 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 TCF19Q9Y242 345 aa6.92□□□□□ -1.3
HMGB4-203ENST00000519684 FOXA2Q9Y261 457 aaPredicted RBP6.92□□□□□ -1.3
HMGB4-203ENST00000519684 TRAV3A0A0B4J244 114 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 LOC102723971A0A1B0GUV8 181 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 SMCO3A2RU48 225 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 MAP1LC3B2A6NCE7 125 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 H7C2Y5 167 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 TNFRSF13BO14836 293 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-203ENST00000519684 SNRNP70P08621 437 aaKnown RBP6.91□□□□□ -1.3
HMGB4-203ENST00000519684 SFTPCP11686 197 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 VDAC2P45880 294 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-203ENST00000519684 TFF3Q07654 80 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 HNF4GQ14541 408 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 RHEBQ15382 184 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 ZNF672Q499Z4 452 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-203ENST00000519684 CFAP161Q6P656 301 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 ETV3LQ6ZN32 361 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 ZNF833PQ6ZTB9 187 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 OR13D1Q8NGV5 346 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 OR10X1Q8NGY0 326 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 MAP1LC3BQ9GZQ8 125 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 HCFC1P51610 2035 aa6.91□□□□□ -1.3
HMGB4-203ENST00000519684 ZFP92A6NM28 416 aa6.9□□□□□ -1.3
HMGB4-203ENST00000519684 IFNA4P05014 189 aa6.9□□□□□ -1.3
HMGB4-203ENST00000519684 SRP19P09132 144 aaKnown RBP6.9□□□□□ -1.3
HMGB4-203ENST00000519684 CT45A6P0DMU7 189 aa6.9□□□□□ -1.3
HMGB4-203ENST00000519684 CT45A5P0DMU8 189 aa6.9□□□□□ -1.3
HMGB4-203ENST00000519684 CT45A7P0DMV0 189 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms