RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 LRRC29Q8WV35 223 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 NINJ1Q92982 152 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 PCGF1Q9BSM1 259 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 OPN3Q9H1Y3 402 aaPredicted RBP7□□□□□ -1.29
CTNNA1-210ENST00000518825 IGHV3OR15-7A0A075B7D8 119 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 SLC31A2O15432 143 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 IFNA1P01562 189 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 CRYAAP02489 173 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 CD82P27701 267 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 GNB1P62873 340 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 MBNL2Q5VZF2 373 aaKnown RBP7□□□□□ -1.29
CTNNA1-210ENST00000518825 SSX9Q7RTT3 188 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 R3HDM4Q96D70 268 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 STARD4Q96DR4 205 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 LOXL4Q96JB6 756 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 HSD17B10Q99714 261 aaKnown RBP7□□□□□ -1.29
CTNNA1-210ENST00000518825 ZNF71Q9NQZ8 489 aaPredicted RBP7□□□□□ -1.29
CTNNA1-210ENST00000518825 PLSCR4Q9NRQ2 329 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 AURKAIP1Q9NWT8 199 aaPredicted RBP7□□□□□ -1.29
CTNNA1-210ENST00000518825 WDR83OSQ9Y284 106 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 HEATR1Q9H583 2144 aaKnown RBP7□□□□□ -1.29
CTNNA1-210ENST00000518825 TRBV20OR9-2A0A075B6H5 130 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 PGPEP1LA6NFU8 196 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 FCGR3BO75015 233 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 VDAC2P45880 294 aaPredicted RBP7□□□□□ -1.29
CTNNA1-210ENST00000518825 ATP5G3P48201 142 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 DUX4L9Q6RFH8 374 aaPredicted RBP7□□□□□ -1.29
CTNNA1-210ENST00000518825 IGFL2Q6UWQ7 119 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 GCSAMQ8N6F7 178 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 ZNRF1Q8ND25 227 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 RHOVQ96L33 236 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 IFI27L2Q9H2X8 130 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 GFOD1Q9NXC2 390 aa7□□□□□ -1.29
CTNNA1-210ENST00000518825 DSCAMO60469 2012 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 CACNA1HO95180 2353 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 LY86O95711 162 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 GYPAP02724 150 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 CD1BP29016 333 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 GPX4P36969 197 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 GALR1P47211 349 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 CR1LQ2VPA4 569 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 SMIM21Q3B7S5 101 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 TREML4Q6UXN2 200 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 LEAP2Q969E1 77 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 PACRGQ96M98 296 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 TAAR6Q96RI8 345 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 ACTR3CQ9C0K3 210 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 FAM234AQ9H0X4 552 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 LAMP3Q9UQV4 416 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 SRRM5B3KS81 715 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 AMBPP02760 352 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 RELBQ01201 579 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 OR2Z1Q8NG97 314 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 MGST2Q99735 147 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 MANBALQ9NQG1 85 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 DUSP13Q9UII6 198 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 GAB2Q9UQC2 676 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 SVILO95425 2214 aa6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 EP300Q09472 2414 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-210ENST00000518825 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 C11orf94C9JXX5 98 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 AQP7O14520 342 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 GFRA3O60609 400 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 RBMXL2O75526 392 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 MBP02144 154 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 EDDM3BP56851 147 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 MAJINQ3KP22 176 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 FAM201AQ5SY85 155 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 LINC01551Q86U37 167 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 TMEM183AQ8IXX5 376 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 ABHD12Q8N2K0 398 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 TCTEX1D1Q8N7M0 179 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 C1orf162Q8NEQ5 155 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 DDB2Q92466 427 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 CIB3Q96Q77 187 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 PATZ1Q9HBE1 687 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 RELNP78509 3460 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 DSCAML1Q8TD84 2053 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 CGB3P0DN86 165 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 CGB7P0DN87 165 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 CDC34P49427 236 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 BPIFB3P59826 476 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 UBE2G2P60604 165 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 PDLIM3Q53GG5 364 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 C22orf34Q6ZV56 151 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 RPRMLQ8N4K4 120 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 ARL6IP6Q8N6S5 226 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 MS4A5Q9H3V2 200 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 PITPNC1Q9UKF7 332 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 SLC25A15Q9Y619 301 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 RBFOX2O43251 390 aaKnown RBP eCLIP6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 GGCTO75223 188 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 HRASP01112 189 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 ADH4P08319 380 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 MYOD1P15172 320 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 PAX1P15863 534 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 GPR12P47775 334 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 FAM3BP58499 235 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 ZNF718Q3SXZ3 478 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 COA6Q5JTJ3 125 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms