RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 SARNPP82979 210 aaKnown RBP3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 NAB1Q13506 487 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 SPRNQ5BIV9 151 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 PLET1Q6UQ28 207 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 LYPD6Q86Y78 171 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 NKAIN4Q8IVV8 208 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF695Q8IW36 515 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF283Q8N7M2 679 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 PIFOQ8TCI5 191 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 TIMM17AQ99595 171 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 SLC19A3Q9BZV2 496 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 OR51B5Q9H339 312 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 PRR34Q9NV39 138 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF257Q9Y2Q1 563 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 KLF12Q9Y4X4 402 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 IGLV3-9A0A075B6K5 115 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 TRAV8-7A0A075B6U6 113 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 TRAV8-4A0A0B4J246 113 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 KLLNB2CW77 178 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 H0Y9J4 135 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 DNASE2O00115 360 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 CST8O60676 142 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 OXTP01178 125 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 P01737 135 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 SMR3BP02814 79 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 MMP7P09237 267 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 IGHV1-8P0DP01 117 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 OR2B6P58173 313 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 TAS2R46P59540 309 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 PMS2P3Q13401 168 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 OR1Q1Q15612 314 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 TOMM34Q15785 309 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 NDUFAF6Q330K2 333 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 IDNKQ5T6J7 187 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 LELP1Q5T871 98 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 NOXRED1Q6NXP6 359 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF584Q8IVC4 421 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 SLC7A5P1Q8MH63 180 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 ARRDC1Q8N5I2 433 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 EEF1AKMT1Q8WVE0 214 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 C17orf50Q8WW18 174 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 MS4A8Q9BY19 250 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 PLSCR3Q9NRY6 295 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 RHBDL2Q9NX52 303 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 RPS6KB2Q9UBS0 482 aa3.12□□□□□ -1.91
HMGB1P23-201ENST00000518743 TRBV6-6A0A0A6YYG2 114 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 A0A1B0GW15 77 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 LINC01619G3V211 115 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 TNFRSF11BO00300 401 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 PSPHP1O15172 72 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 SC5DO75845 299 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 CNIH1O95406 144 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 CYB5R3P00387 301 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 IFNA4P05014 189 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 ELK1P19419 428 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 APLNRP35414 380 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 MTPNP58546 118 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 RAP1AP62834 184 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 IFFO1Q0D2I5 559 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 OR4D1Q15615 310 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 TNXAQ16473 311 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 CDNFQ49AH0 187 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 ATP6AP1LQ52LC2 224 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 SYT6Q5T7P8 510 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 SPATA12Q7Z6I5 190 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 CALHM1Q8IU99 346 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 LYPD1Q8N2G4 141 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 OR2Z1Q8NG97 314 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 CD200R1Q8TD46 325 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 IFT81Q8WYA0 676 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 PTX4Q96A99 478 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 MRPL48Q96GC5 212 aaKnown RBP3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF382Q96SR6 550 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 PDCD1LG2Q9BQ51 273 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 CHAC1Q9BUX1 264 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 TAS2R9Q9NYW1 312 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 STX18Q9P2W9 335 aaKnown RBP3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF780BQ9Y6R6 833 aa3.11□□□□□ -1.91
HMGB1P23-201ENST00000518743 IGLV2-18A0A075B6J9 118 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 PLPP3O14495 311 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 PSMB2P49721 201 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 UBE2E1P51965 193 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 CRISP3P54108 245 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF117Q03924 483 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF404Q494X3 552 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 C1orf134Q5TEV5 83 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 FAM45BPQ6NSW5 357 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 SSX7Q7RTT5 188 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 LRRC8AQ8IWT6 810 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 SPAG16Q8N0X2 631 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 Q8N976 141 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 COQ8AQ8NI60 647 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF420Q8TAQ5 688 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 RPS4Y2Q8TD47 263 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 FAM104AQ969W3 186 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 UBE2E2Q96LR5 201 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 EBPLQ9BY08 206 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 NDEL1Q9GZM8 345 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 ARV1Q9H2C2 271 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 OR2S2Q9NQN1 319 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms